DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bnl and fgf13b

DIOPT Version :10

Sequence 1:NP_732452.1 Gene:bnl / 42356 FlyBaseID:FBgn0014135 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001315421.1 Gene:fgf13b / 403003 ZFINID:ZDB-GENE-040426-1793 Length:257 Species:Danio rerio


Alignment Length:206 Identity:59/206 - (28%)
Similarity:89/206 - (43%) Gaps:50/206 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 LQILRDGVVNGTQDENSEFTILQRSTVDVGRIKLQSVATCLYLCMDACGVPYGSKDFTDDCVFNE 324
            ||:..||.::||::|::.|.|.....|.:..:.:|.|.|.|||.|:..|..|.|:.||.:|.|.|
Zfish    93 LQLQADGTIDGTKEEDNSFAIFNLIPVGLRVVAIQGVQTKLYLAMNNEGYLYTSEHFTPECKFKE 157

  Fly   325 NMGLQNYNTYSSTYH--SQARRVFYLALNGSGQPRRTQIPASRSLGKLSTYTNAITETVPQERVE 387
            ::....|.||||..:  .|:.|.:||.||..||..:               .|.:.:|.|     
Zfish   158 SVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGQIMK---------------GNHVKKTKP----- 202

  Fly   388 QLIAKNFGANRVKHGVRQLCDTGKPLIELIDVARFKAPP-HCSSNTSGSSSSISSSSSSSS---- 447
               |.:|              ..|||    .||.::.|. |..:..|.|.|...:.|.|:|    
Zfish   203 ---AAHF--------------IPKPL----KVAMYREPSLHDLTEFSRSGSGTPTKSRSASAMLN 246

  Fly   448 --KSSSNSSSS 456
              |:.|.:.|:
Zfish   247 GGKTLSQNEST 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bnlNP_732452.1 beta-trefoil_FGF_Bnl-like 246..377 CDD:466997 39/118 (33%)
fgf13bNP_001315421.1 beta-trefoil_FGF13 77..224 CDD:467015 50/171 (29%)

Return to query results.
Submit another query.