DRSC/TRiP Functional Genomics Resources

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Protein Alignment bnl and Fgf6

DIOPT Version :9

Sequence 1:NP_732452.1 Gene:bnl / 42356 FlyBaseID:FBgn0014135 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_571983.1 Gene:Fgf6 / 170700 RGDID:620130 Length:208 Species:Rattus norvegicus


Alignment Length:119 Identity:40/119 - (33%)
Similarity:66/119 - (55%) Gaps:8/119 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 HLAWTSRKIQLYIKNRI---LQILRDGVVNGTQDENSEFTILQRSTVDVGRIKLQSVATCLYLCM 304
            :|....|:.:||....|   ||:..||.::||.:|| .:::|:.|||:.|.:.|..|.:.|::.|
  Rat    78 YLVGIKRQRRLYCNVGIGFHLQVPPDGRISGTHEEN-PYSLLEISTVERGVVSLFGVKSALFIAM 141

  Fly   305 DACGVPYGSKDFTDDCVFNENMGLQNYNTYSSTYHSQARRVFYLALNGSGQPRR 358
            ::.|..|.:..|.|:|.|.|.:...|||.|.|..:    |..|:||:..|:.:|
  Rat   142 NSKGRLYTTPSFQDECKFRETLLPNNYNAYESDLY----RGTYIALSKYGRVKR 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bnlNP_732452.1 FGF 247..376 CDD:214665 39/115 (34%)
Fgf6NP_571983.1 FGF 84..205 CDD:395115 39/113 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45368
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11486
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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