DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bnl and Fgf1

DIOPT Version :9

Sequence 1:NP_732452.1 Gene:bnl / 42356 FlyBaseID:FBgn0014135 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_006525704.1 Gene:Fgf1 / 14164 MGIID:95515 Length:177 Species:Mus musculus


Alignment Length:121 Identity:42/121 - (34%)
Similarity:64/121 - (52%) Gaps:5/121 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 ERSTVPQSHLAWTSRKIQLYIKN--RILQILRDGVVNGTQDENSEFTILQRSTVDVGRIKLQSVA 297
            ||..:|..:  :...|: ||..|  ..|:||.||.|:||:|.:.:...||.|....|.:.::...
Mouse    36 ERFNLPLGN--YKKPKL-LYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESAGEVYIKGTE 97

  Fly   298 TCLYLCMDACGVPYGSKDFTDDCVFNENMGLQNYNTYSSTYHSQARRVFYLALNGS 353
            |..||.||..|:.|||:...::|:|.|.:...:||||:|..|::......|..|||
Mouse    98 TGQYLAMDTEGLLYGSQTPNEECLFLERLEENHYNTYTSKKHAEKNWFVGLKKNGS 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bnlNP_732452.1 FGF 247..376 CDD:214665 39/109 (36%)
Fgf1XP_006525704.1 FGF 47..170 CDD:365916 39/108 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3885
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43297
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11486
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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