DRSC/TRiP Functional Genomics Resources

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Protein Alignment bnl and fgf6

DIOPT Version :9

Sequence 1:NP_732452.1 Gene:bnl / 42356 FlyBaseID:FBgn0014135 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001136295.1 Gene:fgf6 / 100217326 XenbaseID:XB-GENE-1018159 Length:195 Species:Xenopus tropicalis


Alignment Length:150 Identity:54/150 - (36%)
Similarity:75/150 - (50%) Gaps:22/150 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 SSNTPISNLD---RNERSTVPQSHLAWTSRKIQLYIKNRI---LQILRDGVVNGTQDENSEFTIL 281
            |...|...||   :|:       :|....|..:||....|   ||||.||.::|...|| .:::|
 Frog    49 SLGMPADQLDVKWKND-------YLLGIKRHRRLYCNVGIGFHLQILPDGSISGVHSEN-PYSLL 105

  Fly   282 QRSTVDVGRIKLQSVATCLYLCMDACGVPYGSKDFTDDCVFNENMGLQNYNTY-SSTYHSQARRV 345
            :.||||.|.|.|..|.:.|::.|::.|..|.|..|.|:|.|.|.:...|||.| |..||..    
 Frog   106 EISTVDRGIISLFGVKSDLFVAMNSKGRMYASPSFQDECKFREIVLSNNYNAYESELYHGA---- 166

  Fly   346 FYLALNGSGQPRR-TQI-PA 363
             ||.|:..|:.:| |:| ||
 Frog   167 -YLGLSKHGRIKRGTKISPA 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bnlNP_732452.1 FGF 247..376 CDD:214665 47/122 (39%)
fgf6NP_001136295.1 FGF 71..192 CDD:365916 47/120 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48446
Panther 1 1.100 - - O PTHR11486
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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