DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11453 and AT1G20480

DIOPT Version :9

Sequence 1:NP_650832.1 Gene:CG11453 / 42355 FlyBaseID:FBgn0038734 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_173472.1 Gene:AT1G20480 / 838636 AraportID:AT1G20480 Length:565 Species:Arabidopsis thaliana


Alignment Length:577 Identity:147/577 - (25%)
Similarity:250/577 - (43%) Gaps:109/577 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FDKYTKIWSGPR------PASFFDADCSI------GKILFAFMRNHPNSICQISDTEGTALTNGE 60
            |.:.|.|:...|      |..|.|....|      ||.:|            :....|..|:..|
plant    27 FCESTSIFYSKREPMALPPNQFLDVTSFIASQPHRGKTVF------------VDAVTGRRLSFPE 79

  Fly    61 AITFAIRIAQQLKAMGLKQDDVVGIVGTNTTYLMPVV-LGCLLNGTPFHAVSPWQDEDTIKHLFS 124
            ......|:|..|.|:|:::.:||.|:..| :.|.|:| |..:..|......:|....|.|.....
plant    80 LWLGVERVAGCLYALGVRKGNVVIILSPN-SILFPIVSLSVMSLGAIITTANPINTSDEISKQIG 143

  Fly   125 ITRPKLIFCDGKCFQRLSIIAR----ILKSHVYTLKDHRLG-----MPRVEDLLEPTTAELYYVP 180
            .:||.|.|...|...:|:..:.    ::....|.:.....|     :.|:|.::|...:|.....
plant   144 DSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDYHVPSQSYGDRVKLVGRLETMIETEPSESRVKQ 208

  Fly   181 ETLLLGGDHTVAILCTSGTTGLPKAVCISN-------------------SAC------LFDF-GF 219
            .   :..|.|.|:|.:|||||..|.|.:|:                   :.|      :|.| ||
plant   209 R---VNQDDTAALLYSSGTTGTSKGVMLSHRNLIALVQAYRARFGLEQRTICTIPMCHIFGFGGF 270

  Fly   220 VTGQDVLLSFSTIDWSAGMFNMLFSCCHGSTRIITDRPYTPEYMIQLVEKYKVTLLTVVPQQVAS 284
            .||      ...:.|:                |:....:....::..||.::.:.|::||..|.:
plant   271 ATG------LIALGWT----------------IVVLPKFDMAKLLSAVETHRSSYLSLVPPIVVA 313

  Fly   285 LLK--TPTLNKQRLASIRFVSVGGGSC-------YVANLLKLQEFLITGQISYGYALTECGGVAA 340
            ::.  ....:|..|:|:..|..||...       :|.|..|:       :|..||.|||...:||
plant   314 MVNGANEINSKYDLSSLHTVVAGGAPLSREVTEKFVENYPKV-------KILQGYGLTESTAIAA 371

  Fly   341 NM----GVAKPSSVGRIVPGVRVKILD-EAGRSLGHGETGEILVHNGKVWNGYYANPNESKRMQD 400
            :|    ...:..:.|.:.|.|..||:| :.||.||..:|||:.:.:..|..||:.|...:....|
plant   372 SMFNKEETKRYGASGLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGYFKNKEATASTID 436

  Fly   401 YQGWFHTGDMGYFDNENYLHIVERKEDLLRFHGAQYSPQEIEQVIAELPDVIEACVFGLWNEVDG 465
            .:||..|||:.|.|.:.::.:|:|.::|::.:|.|.:|.|:|.::...|::.:|.|..:.:...|
plant   437 SEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAG 501

  Fly   466 DPAAAAVVKIPGSRLTEMDIVEYVAKRLVVDHKQLHCGVFFLPELPKTGSGKVLRQQ 522
            ....|.:|:..||.|:|.:|:.:|||: |..:|::. .|.||..:||..|||:||::
plant   502 QYPMAYIVRKVGSNLSESEIMGFVAKQ-VSPYKKIR-KVTFLASIPKNPSGKILRRE 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11453NP_650832.1 CaiC 18..530 CDD:223395 144/567 (25%)
Firefly_Luc_like 46..519 CDD:213279 134/522 (26%)
AT1G20480NP_173472.1 PLN02574 27..562 CDD:215312 147/577 (25%)
4CL 43..557 CDD:213272 143/561 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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