DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11453 and acsl1b

DIOPT Version :9

Sequence 1:NP_650832.1 Gene:CG11453 / 42355 FlyBaseID:FBgn0038734 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001003569.1 Gene:acsl1b / 445175 ZFINID:ZDB-GENE-040801-88 Length:697 Species:Danio rerio


Alignment Length:434 Identity:105/434 - (24%)
Similarity:169/434 - (38%) Gaps:121/434 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 VAILC-TSGTTGLPKA---------------VCISNSACLFDFGFVTGQDVLLSFSTIDWSAGMF 239
            :|::| ||||||.||.               :.::||.|.     ::.:|..:|:..:   |.||
Zfish   269 LAVICFTSGTTGNPKGAMLTHRNIVSNISAFIHVTNSTCP-----LSSRDSHISYLPL---AHMF 325

  Fly   240 NMLFS---CCHGS--------TRIITDRPYTPEYMIQLVEKYKVTLLTVVPQ-------QVASLL 286
            ..:..   ..||:        .|::.|.      :|.|    |.|:..|||:       ::....
Zfish   326 ERVVQGVVLLHGARIGYFQGDIRVLMDD------LIAL----KPTIFPVVPRLLNRMFDKIYGQA 380

  Fly   287 KTPTLNKQRLASIRF---------------------------VSVGGGSC---YVANLLKLQEFL 321
            .||.  |:||....|                           .||||  |   .|.....:.|.:
Zfish   381 NTPL--KRRLLEFAFRRKEAEMKSGIMRRDSIWDKIIFKKVQASVGG--CVRMMVTGAAPISEPV 441

  Fly   322 IT-------GQISYGYALTEC--GGVAANMGVAKPSSVGRIVPGVRVKILD--EAGRSLGHGETG 375
            :|       .|...||..|||  |......|......||..:|...:|::|  |......:|| |
Zfish   442 LTFLRAALGCQFYEGYGQTECTAGSTTTLPGDWTAGHVGAPLPCNDIKLVDVAEMNYYAANGE-G 505

  Fly   376 EILVHNGKVWNGYYANPNESKRMQDYQGWFHTGDMGYFDNENYLHIVERKEDLLRFHGAQY-SPQ 439
            |:.|.....:.||..:|.::|...|.:||.||||:|.:.....|.||:||:.:.:....:| :|:
Zfish   506 EVCVRGPNAFKGYLKDPEKTKEALDEEGWVHTGDIGRWLPNGSLKIVDRKKHIFKLAQGEYIAPE 570

  Fly   440 EIEQVIAELPDVIEACVFGLWNEVDGDPAAAAVVKIPGSRLTEMDIVEYVAKRLVVD-------- 496
            :||.:......|::|.|.|     |...|....:.:|     :.|.:...||:..::        
Zfish   571 KIENIYIRSEAVVQAFVHG-----DSLQACLVAIIVP-----DPDFLPGWAKKRGIEGTYEDLCK 625

  Fly   497 HKQLHCGVFFLPELPKTG--SGKVLRQQARDQALGKKWADHGNG 538
            :|.:...:  |.::.|.|  ||....:|.:|.||..:.....||
Zfish   626 NKDIKKAI--LEDIIKLGKESGLKSFEQVKDIALHSEMFTIQNG 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11453NP_650832.1 CaiC 18..530 CDD:223395 103/424 (24%)
Firefly_Luc_like 46..519 CDD:213279 99/413 (24%)
acsl1bNP_001003569.1 PLN02736 88..695 CDD:178337 105/434 (24%)
LC-FACS_euk 116..692 CDD:213293 105/434 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583138
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.