DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11453 and Acsm3

DIOPT Version :9

Sequence 1:NP_650832.1 Gene:CG11453 / 42355 FlyBaseID:FBgn0038734 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_006230168.1 Gene:Acsm3 / 24763 RGDID:62086 Length:581 Species:Rattus norvegicus


Alignment Length:513 Identity:127/513 - (24%)
Similarity:213/513 - (41%) Gaps:94/513 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 KAMGLKQDDVVGIVGTNTTYLMPVV-------LGCLLNGTPFHAVSPWQDEDTIKHLFSITRPKL 130
            :|..|::.|.|.::       :|.:       :.||..||.....:....:..|.:....::.|.
  Rat   107 EACSLQRGDRVMVI-------LPKIPEWWLANVACLRTGTVLIPGTTQLTQKDILYRLQSSKSKC 164

  Fly   131 IFCDGKCFQRLSIIA---RILKSHVYTLKDHRLGMPRVEDLLEPTTAELYYVPETLLLGGDHT-- 190
            |..|......:.|:|   ..|.|.:...:..|.|...::::::       |..::      ||  
  Rat   165 IITDDTLAPAVDIVAAKCENLHSKLIVSQHSREGWGNLKEMMK-------YASDS------HTCV 216

  Fly   191 -------VAILCTSGTTGLPKAVCISNSACLFDFGF-VTGQ--------DVLLSFSTIDWSAGMF 239
                   :||..||||||.||.:..::|:  |..|. |.|:        ||:.:.|...|:...:
  Rat   217 DTKHNELMAIYFTSGTTGPPKMIGHTHSS--FGLGLSVNGRFWLDLIASDVMWNTSDTGWAKSAW 279

  Fly   240 NMLFS------CCHGSTRIITDRPYTPEY----MIQLVEKYKVTLLTVVPQQVASLLKTPTLNKQ 294
            :.:||      |....        |.|.:    ::|.:.|:.:|:....|.....|::.......
  Rat   280 SSVFSPWTQGACVFAH--------YLPRFDSTSILQTLSKFPITVFCSAPTAYRMLIQNDITRSY 336

  Fly   295 RLASIRFVSVGGGSCYVANLLKLQEFLITGQISYGYALTE----CGGVAANMGVAKPSSVGRIVP 355
            :..|::. .|..|......:::..:......|..||..||    ||.. ..|.: ||.|:|:..|
  Rat   337 KFNSLKH-CVSAGEPINPEVMEQWKKKTGLDIYEGYGQTETVLICGNF-KGMKI-KPGSMGKPSP 398

  Fly   356 GVRVKILDEAGRSLGHGETGEILV-----HNGKVWNGYYANPNESKRMQDYQGWFH-TGDMGYFD 414
            ...|:||||.|..|..|:.|:|.|     ....::..|..||  ||.....:|.|: |||.||.|
  Rat   399 AFNVEILDENGTILPPGQEGDIAVQVLPDRPFGLFTHYVDNP--SKTASTLRGNFYITGDRGYMD 461

  Fly   415 NENYLHIVERKEDLLRFHGAQYSPQEIEQVIAELPDVIEACVFGLWNEVDGDPAAAAVVKIPGSR 479
            .:.|...|.|.:|::...|.:..|.|:|..:.|.|.:.|:.|....:.:.|:...|.:|..|..:
  Rat   462 EDGYFWFVARSDDVILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKAFIVLNPDYK 526

  Fly   480 LTEM-----DIVEYVAKRLVVDHKQLHCGVFFLPELPKTGSGKVLRQQARDQALGKKW 532
            |.:.     :|.|:| |:....:|... .:.|:.|||||.||||.|.:.|    .|:|
  Rat   527 LHDQEQLKKEIQEHV-KKTTAPYKYPR-KIEFIEELPKTVSGKVKRNELR----RKEW 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11453NP_650832.1 CaiC 18..530 CDD:223395 125/509 (25%)
Firefly_Luc_like 46..519 CDD:213279 122/498 (24%)
Acsm3XP_006230168.1 Acs 45..575 CDD:223442 125/508 (25%)
AFD_class_I 48..578 CDD:302604 126/511 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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