DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11407 and CMR2

DIOPT Version :9

Sequence 1:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_014736.1 Gene:CMR2 / 854260 SGDID:S000005619 Length:1648 Species:Saccharomyces cerevisiae


Alignment Length:610 Identity:103/610 - (16%)
Similarity:210/610 - (34%) Gaps:186/610 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LIAQISATENTILTRAELQANAMHIASYMR-----SLGLLQMDIVGIIARNTTHISAVAYACFFN 104
            |:...::.:|.:..:....:....:|.:::     .:.|...|.:.|:..|:....|:..||.:.
Yeast  1007 LVNSSASNDNNVHKKVSWASFGKIVAGFLKKIVGSKIPLKHGDPIIIMCENSVEYVAMIMACLYC 1071

  Fly   105 GIAFHSLNISYEQSTIE----------------------KLFSITRPNIIF--CDGDEFEKVRSA 145
            .:....|. |.::|.||                      ||.|:...|.:.  |    |:|.:|.
Yeast  1072 NLLVIPLP-SVKESVIEEDLKGLVNIIQSYKVKRVFVDAKLHSLLNDNNVVNKC----FKKYKSL 1131

  Fly   146 TAQLDVKIITMRNHPSGSIRIDQVLSTPIEKNF--QPVRLEQGN--DQTLAILCSSGTTGIPKAV 206
            ..::.|         ...::....|:..:.||.  |....:.|.  ..|..::..:....:...:
Yeast  1132 IPKITV---------FSKVKTKNALTVSMFKNVLKQKFGAKPGTRIGMTPCVVWVNTEYDVTSNI 1187

  Fly   207 TIT-------NSRQILNSSHSLTTNDVQY---SHST-----LDWITGLLTTVTSGVFSTKRIIAD 256
            .:|       |:.:|:..:..|..|...:   ||::     ...:.|:.|..::.:||...::.|
Yeast  1188 HVTMTHSSLLNASKIVKETLQLRNNSPLFSICSHTSGLGFMFSCLLGIYTGASTCLFSLTDVLTD 1252

  Fly   257 ---------NIFDPEFFMRLVEEHQI----TWIIQAPAHMAMMVNSPSFTTSDLSSLRYYLFGG- 307
                     |:...:.:::|...:.:    :.:|:...:....:||....||  .|||..:|.| 
Yeast  1253 PKEFLIGLQNLNVKDLYLKLETLYALLDRASSLIEGFKNKKENINSAKNNTS--GSLREDVFKGV 1315

  Fly   308 --------SRASVETQHRIRSR---LSKDCLHFAY----GFTELGSMAA------LNLHFDE--- 348
                    :|..:.|...|..|   :|..|...:|    .|..|.|:.:      ::|:.|.   
Yeast  1316 RNIMIPFPNRPRIYTIENILKRYSTISLSCTQISYVYQHHFNPLISLRSYLDIPPVDLYLDPFSL 1380

  Fly   349 --------KPNSVGRLVAGLKLKV-------ICEKGESLGPDEV-----GELCLWNGQYWA---- 389
                    .||.|.   ||..:|:       :|.....:.|:.:     ||.    |:.|.    
Yeast  1381 REGIIREVNPNDVS---AGNYIKIQDSGVVPVCTDVSVVNPETLLPCVDGEF----GEIWCCSEA 1438

  Fly   390 -------------GYYGNPEETH----KMRDHHN----WFHTGDLGYV------DDDG------F 421
                         ..|.:|..|.    ||:...|    :..|||||::      :..|      .
Yeast  1439 NAFDYFVCNSSKNKLYKDPFITEQFKSKMKSEVNNTLSYLRTGDLGFIKNVSCTNSQGEVVNLNL 1503

  Fly   422 IYIVERKKDMLKFQNIMYYPNEIESVISKMPDVVEVCVFGV--------------WNEINGDEAT 472
            ::::....:.::...:.::.:::|..:..:...:..|:...              .|.|.|:..|
Yeast  1504 LFVLGSIHESIEILGLTHFVSDLERTVKDVHSDIGSCLIAKAGGLLVCLIRCKERHNPILGNLTT 1568

  Fly   473 AAV---VKKRGSALTAQDIVDYVET 494
            ..|   :.|.|..|   |:..:|.|
Yeast  1569 LIVSELLNKHGVIL---DLCTFVRT 1590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11407NP_650831.1 CaiC 26..523 CDD:223395 103/610 (17%)
Firefly_Luc_like 47..522 CDD:213279 102/608 (17%)
CMR2NP_014736.1 DMAP_binding 5..121 CDD:368923
AFD_class_I 179..893 CDD:418409
Dip2 1004..1626 CDD:341231 103/610 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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