DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acsx3 and acsl3b

DIOPT Version :10

Sequence 1:NP_650831.1 Gene:Acsx3 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001139404.2 Gene:acsl3b / 559656 ZFINID:ZDB-GENE-030131-492 Length:711 Species:Danio rerio


Alignment Length:533 Identity:116/533 - (21%)
Similarity:198/533 - (37%) Gaps:128/533 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 AMHIASYMRSLGLLQMDIVGIIARNTTHISAVAYACFFNGIAFHSLNISYEQSTIEKLFSITRPN 130
            |....|.:.:||...:..:.|...........|.|||.......:|..:...|.|....:.|...
Zfish   135 AQRFGSGLAALGQKPLCNIAIFCETRAEWVIAAQACFMYNFPLVTLYSTLGGSAIAHGLNETEVT 199

  Fly   131 IIFCDGDEFE-KVRSATAQ---------LDVKIITMRNHPSGSI-----RIDQVLSTPIEKNFQP 180
            .|....|..: ::::...:         :|.|..:..:.|.|.:     .:.::.|.|  :|...
Zfish   200 HIVTSKDLLQSRLKAILLEVPRLKHIIVVDTKPTSWPDLPRGIMVHNMAAVQELGSKP--ENIMV 262

  Fly   181 VRLEQGNDQTLAILCSSGTTGIPKAVTITNSRQILNSS------HSLTTNDVQYSHSTLDWITGL 239
            .|.:........|:.:||:|||||.|.|::|..|...:      .:|..||....:..|..:..|
Zfish   263 SRRQPVPSDIAVIMYTSGSTGIPKGVMISHSNIIAGITGMAERIPNLDENDTYIGYLPLAHVLEL 327

  Fly   240 ---LTTVTSGV---FSTKRIIAD-------------NIFDPEFF--------------MRLVEEH 271
               |..|:.|.   :|:.:.:||             ::..|...              |..|||.
Zfish   328 SAELVCVSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEM 392

  Fly   272 ---QITWIIQAPAHMAMMVNSPSFTTSDLSSL-------------RYYLFGGSRASVETQHRIRS 320
               |.|..:.|..:....: |..:||.....|             |..|.||:..|..||     
Zfish   393 SSVQKTLFVLAYNYKMEQI-SKGYTTPLCDRLVFRKVRSLLGGNTRVLLSGGAPLSAATQ----- 451

  Fly   321 RLSKDC----LHFAYGFTE---LGSMAALNLHFDEKPNSVGRLVAGLKLKVIC--------EKGE 370
            |....|    :...||.||   .|:::.::.:      |.||:.|.|    :|        |:|.
Zfish   452 RFMNICFCCPVGQGYGLTETCGAGTISEMSDY------STGRVGAPL----VCSEIMLKDWEEGG 506

  Fly   371 SLG---PDEVGELCLWNGQYWAGYYGNP----EETHKMRDHHNWFHTGDLGYVDDDGFIYIVERK 428
            ..|   |:..||:.:.......|||.|.    |:..:.::...||.|||:|....||.:.|::||
Zfish   507 YFGTDKPNPRGEILIGGPNVTMGYYKNEQKNREDFFEDKNGQRWFCTGDIGEFHPDGCLKIIDRK 571

  Fly   429 KDMLKFQNIMYYP-NEIESVISKMPDVVEVCVFGVWNEINGDEA------------TAAVVKKRG 480
            ||::|.|...|.. .::|:|:...|.:..:|.:.     |.||:            ..|:..::|
Zfish   572 KDLVKLQAGEYVSLGKVEAVLKNCPLIDNICAYA-----NSDESYVIGFVVPNQKQLTALAGQKG 631

  Fly   481 SALTAQDIVDYVE 493
            ...:.::|.::.|
Zfish   632 IRGSWEEICNHAE 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acsx3NP_650831.1 Firefly_Luc_like 47..522 CDD:341237 116/533 (22%)
acsl3bNP_001139404.2 None

Return to query results.
Submit another query.