DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11407 and CG3961

DIOPT Version :9

Sequence 1:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:568 Identity:112/568 - (19%)
Similarity:204/568 - (35%) Gaps:111/568 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ELQANAMHIASYMRSLGLLQMDIVGIIARNTTHISAVAYACFFNGIAFHSLNISYEQSTIEKLFS 125
            |....|.:..:.|.:||.....::||.::|..........|:...:....|..:........:..
  Fly   138 EALLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIR 202

  Fly   126 ITRPNIIFCDGDEFEKVRSATAQLDVKIITMRNHPSGSIRIDQVLSTPIEKN-------FQPVRL 183
            .|...::..:.|....:....|...:|||         :.|..:..|.:|:.       |..:.:
  Fly   203 QTDMQVVIVEDDGKAAMLLEKAPRSLKII---------VAIKPIRQTTLERARSRGIQIFSFIDV 258

  Fly   184 E----QGND-------QTLAILC-SSGTTGIPKAVTITNSRQILN--------SSHSLTTNDVQ- 227
            |    :||.       :.|..:| :|||||.||.|.:|:...:..        ..|.:...||. 
  Fly   259 EKLGAKGNHPEVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAGDVMV 323

  Fly   228 ------------------YSHSTLDWITGLLTTVTSGVFSTKRIIADNIFDPEFFMRLVEEHQ-- 272
                              |....:.:.:|.:..:|:.:...|..:...:  |....|:.::.|  
  Fly   324 SFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPAV--PRLLNRVYDKIQND 386

  Fly   273 --ITWIIQAPAHMAMMVNSPSFTTSDL-------------------SSLRYYLFGGSRASVETQH 316
              .:.:.:...:|||...........|                   .:||..:.|.:..:.....
  Fly   387 ISASGLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLT 451

  Fly   317 RIRSRLSKDCLHF-AYGFTELGSMAALNLHFDEKPNSVGRLVAGLKLKVI-CEKGESLGPDEVGE 379
            .:|..|.  ||.. .||.||......|.:..|..||.||..|:...:|:: ..:.|.......||
  Fly   452 FMRCALG--CLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLVDVPEMEYFANQNTGE 514

  Fly   380 LCLWNGQYWAGYYGNPEETHKMRDHHNWFHTGDLGYVDDDGFIYIVERKKDMLKFQNIMY-YPNE 443
            :|:.....:.|||.:||:|.:..|...|.||||:|....:|.:.|::|:|.:.|.....| .|.:
  Fly   515 VCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEK 579

  Fly   444 IESVISKMPDVVEVCVFG-------------------VWNEINGDEATAAVV--KKRGSALTAQD 487
            ||::.:....|.:|.|:|                   .|...|....|.:|:  .|....|...|
  Fly   580 IENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNNKNVKELIMND 644

  Fly   488 IVDY-----VETHIDAKYKQLNGGAIIVEDLVRSPNGKTNRMANKAFF 530
            ::::     :::....|...|:.....|::.:.:|..|..|...|::|
  Fly   645 MLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYF 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11407NP_650831.1 CaiC 26..523 CDD:223395 109/559 (19%)
Firefly_Luc_like 47..522 CDD:213279 109/558 (20%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 112/568 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452243
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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