DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11407 and Acsm1

DIOPT Version :9

Sequence 1:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001101972.2 Gene:Acsm1 / 361638 RGDID:1306813 Length:577 Species:Rattus norvegicus


Alignment Length:579 Identity:126/579 - (21%)
Similarity:229/579 - (39%) Gaps:130/579 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PASYYDADRKIWSGDQLEYYFDPHLSIGEIIFNEMRRHPQLIAQISATENTILTRAELQANAMHI 69
            ||.::..|:    ||::::           .|.|:|                    :|...|.::
  Rat    72 PALWWVNDQ----GDEIKW-----------SFRELR--------------------DLSRRAANV 101

  Fly    70 ASYMRSLGLLQMDIVGIIARNTTHISAVAYACFFNGIAF-------HSLNISYEQSTIEKLFSIT 127
              :.::.||...|.:.:|.........|...|...|:.|       .:.:|.|.....:....:|
  Rat   102 --FEQTCGLQHGDRLALILPRVPEWWLVTVGCIRTGVIFIPGTAQMKAKDILYRIQMSQAKAIVT 164

  Fly   128 RPNIIFCDGDEFEKVRSATAQLDVKIITMRNHPSGSIRIDQVLSTPIEKNFQPVRLEQGNDQT-- 190
            ..:::    .|.|.|.|....|..||:...::..|.:            ||:.:......|.|  
  Rat   165 TDSLV----PEVESVASECPGLKTKIVVSDHNHEGWL------------NFRTLLRSASPDHTCV 213

  Fly   191 -------LAILCSSGTTGIPKAV----------TITNSRQILNSSHSLTTNDVQYSHSTLDWITG 238
                   :.|..:|||||.||..          ::.:.|:.|    .|.|:||.:..|...||..
  Rat   214 KSKMKDPMVIFFTSGTTGYPKMAKHNQGLAFRSSVPSCRKFL----KLKTSDVIWCMSDPGWILA 274

  Fly   239 ----LLTTVTSGVFSTKRIIADNI--FDPEFFMRLVEEHQITWIIQAPAHMAMMVNSPSFTTSDL 297
                ||...|:|.    .:...|:  |||:..:..:.::.||..:.|||...|::.      .::
  Rat   275 TVGCLLEPWTAGA----TVFVHNLPQFDPKVIVETLFKYPITQCLAAPAVYRMVLQ------KNI 329

  Fly   298 SSLRYYLF-----GGSRASVE--TQHRIRSRLSKDCLHFAYGFTELGSMAALNLHFDEKPNSVGR 355
            |:||:...     ||.....|  .|.:.|:.||   :|..||.:|.|...|:......|..|:|:
  Rat   330 SNLRFPTLEHCATGGESLLPEEYEQWKQRTGLS---IHEVYGQSETGITCAIFREMKVKRGSIGK 391

  Fly   356 LVAGLKLKVICEKGESLGPDEVGELCLWNG---------QYWAGYYGNPEETHKMRDHHNWFHTG 411
            .:....:::|.|||..|.|:..|.:    |         ..:.||..:||:|.:: :..:::::|
  Rat   392 AILPFDIQIIDEKGNILPPNTEGYI----GIRIKPTRPLGLFVGYENSPEKTSEV-ECGDFYNSG 451

  Fly   412 DLGYVDDDGFIYIVERKKDMLKFQNIMYYPNEIESVISKMPDVVEVCVFGVWNEINGDEATAAVV 476
            |...:|:||:|:.:.|..|::........|.|:|:.:.:.|.|.|..|....::..|:...|.:|
  Rat   452 DRATIDEDGYIWFLGRSDDVINASGYRIGPTEVENALVEHPAVSESAVVSSPDKDRGEVVKAFIV 516

  Fly   477 -KKRGSALTAQDIVDYVETH---IDAKYKQLNGGAIIVEDLVRSPNGKTNR--MANKAF 529
             .....:...:.::..::.|   :.|.||... ....|.:|.::..||..|  :.||.|
  Rat   517 LNPEFLSHDQEQLIKELQEHVKSVTAPYKYPR-KVEFVSELPKTITGKIKRKELRNKEF 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11407NP_650831.1 CaiC 26..523 CDD:223395 117/548 (21%)
Firefly_Luc_like 47..522 CDD:213279 114/526 (22%)
Acsm1NP_001101972.2 AFD_class_I 46..573 CDD:302604 124/576 (22%)
Acs 46..570 CDD:223442 123/573 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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