DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11407 and hll

DIOPT Version :9

Sequence 1:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:555 Identity:116/555 - (20%)
Similarity:197/555 - (35%) Gaps:118/555 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YRPASYYDADRKIWSGDQLEYYFD---------PHLSIGEIIFNEMRRH---PQLIAQISATEN- 54
            ||..|.:||         ::...|         |..:|.|.......::   |.|:.:...:.| 
  Fly    10 YRSTSLHDA---------VKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSGND 65

  Fly    55 --TILTRAELQANAMHIASYMRSLGLLQMDIVGIIARNTTHISAVAYACFFNGIAFHSLNISYEQ 117
              |.||..|.|......|..:.|:|:.:...|||:|.|........:.....|.....:..|...
  Fly    66 GWTTLTFGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSA 130

  Fly   118 STIEKLFSITRPNI-IFCDGDEFEKVRS---------ATAQLDVKIITMRNHPSGSIR----IDQ 168
            ..:..:.:....:: :..|..:..|:|:         |..||........:|..|...    .:|
  Fly   131 EAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQ 195

  Fly   169 VLSTPIEKNFQPVRLEQGNDQTLAILCSSGTTGIPKAVTITNSRQILNS-SHSLTTNDVQ----- 227
            ..|:.:::...........::...::.:|||.|:||||.:::...:.:: |.:....|:|     
  Fly   196 TFSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGKES 260

  Fly   228 -YSHSTLDWITGLLTTVTSGV-------FSTKRIIADNIFD-------------PEFFMRL---- 267
             .|:..|..:...:..|..|:       |:.|..:...:..             |..|.:|    
  Fly   261 FVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQERL 325

  Fly   268 ---------------------VEEHQITWII--------QAPAHMAMMVNSPSFTTSDLSSLRYY 303
                                 |.|||.|.:.        .|...:|..|..|......:.:.|.:
  Fly   326 VAAEAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVF 390

  Fly   304 LFGGSRASVETQHRIRSRLSKD-CLHFAYGFTELGSMAALNLHFDEKPNSVGRLVAGLKLKVICE 367
            ..||:..|.|.:...   |..| .|...||.:|......||:..... .|.|:...|:.||:   
  Fly   391 FTGGAPTSEELKQFF---LGLDIALGECYGMSETSGAITLNVDISNL-YSAGQACEGVTLKI--- 448

  Fly   368 KGESLGPD--EVGELCLWNGQYWAGYYGNPEETHKMRDHHNWFHTGDLGYVDDDGFIYIVERKKD 430
                ..||  ..||:.:.....:.||.|.|::|.:......|.|:|||||:|..|.:.|..|.|:
  Fly   449 ----HEPDCNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKE 509

  Fly   431 ML---KFQNIMYYPNEIESVISK-MPDVVEVCVFG 461
            ::   ..:||.  |..||.:|.| :|.|..|.:.|
  Fly   510 LIITAGGENIP--PVHIEELIKKELPCVSNVLLIG 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11407NP_650831.1 CaiC 26..523 CDD:223395 111/532 (21%)
Firefly_Luc_like 47..522 CDD:213279 105/499 (21%)
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 105/494 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452219
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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