DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11407 and Acsm2

DIOPT Version :9

Sequence 1:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_653349.1 Gene:Acsm2 / 246263 RGDID:708383 Length:572 Species:Rattus norvegicus


Alignment Length:563 Identity:118/563 - (20%)
Similarity:215/563 - (38%) Gaps:115/563 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IW----SGDQLEYYFDPHLSIGEIIFNEMRRHPQLIAQISATENTILTRAELQANAMHIASYMRS 75
            :|    ||::|::.|                  :.:::||.....:||.|               
  Rat    69 LWWMNGSGEELKWNF------------------RELSEISKQTANVLTGA--------------- 100

  Fly    76 LGLLQMDIVGIIARNTTHISAVAYACFFNGIAF-------HSLNISYEQSTIEKLFSITRPNIIF 133
            .||.:.|.|.::.........|...|..:|:.|       .|.:|.|...:.:....:....:: 
  Rat   101 CGLQRGDRVAVVLPRVPEWWLVTLGCMRSGLVFMPGTTQMKSTDILYRLQSSKARAIVAGDEVV- 164

  Fly   134 CDGDEFEKVRSATAQLDVKIITMRNHPSGSIRIDQVLSTPIEKNFQPVR--LEQGNDQTLAILCS 196
               .|.:.|....:.|.:|::....:..|.:....:|     |:..|:.  :|..:.::.||..:
  Rat   165 ---QEVDAVAPDCSFLKIKLLVSEKNREGWLNFKALL-----KDASPIHQCVETVSQESAAIYFT 221

  Fly   197 SGTTGIPKAVTITNSRQILNSSH--------------SLTTNDVQYSHSTLDWITGLLTTVTSGV 247
            |||:|.||         :...||              .|..:|..::.|...||..:|     |.
  Rat   222 SGTSGPPK---------MAEHSHCSLGLKAKMDAGWTGLGPSDTMWTISDTGWILNIL-----GS 272

  Fly   248 FSTKRIIADNI-------FDPEFFMRLVEEHQITWIIQAPAHMAMMVNSPSFTTSDLSSLRY--- 302
            |....::...|       |||:..::::..:.|..::.||....|::.      .||||.::   
  Rat   273 FLEPWVLGTCIFVHLLPKFDPQTVLKVLSSYPINTLLGAPLIYRMLLQ------QDLSSYKFPHL 331

  Fly   303 --YLFGGSRASVETQHRIRSRLSKDCLHFAYGFTELGSMAALNLHFDEKPNSVGRLVAGLKLKVI 365
              ...||.....||....:::...: :...||.||.|....::.....||..:|..:....::||
  Rat   332 HSCFSGGETLLPETLESWKAKTGLE-IREIYGQTETGITCRVSRTMKVKPGYLGTAIVPYDVQVI 395

  Fly   366 CEKGESLGPDEVGELCLW------NGQYWAGYYGNPEETHKMRDHHNWFHTGDLGYVDDDGFIYI 424
            .|:|..|.|.:.|::.|.      .|.: :||..||::|........|. .||.|..|.:|:.:.
  Rat   396 DEQGNVLPPGKEGDMALRVKPIRPIGMF-SGYVDNPKKTQANIRGDFWL-LGDRGIKDTEGYFHF 458

  Fly   425 VERKKDMLKFQNIMYYPNEIESVISKMPDVVEVCVFGVWNEINGDEATAAVVKKRGSALTAQD-I 488
            :.|..|::........|:|:|:.:.:.|.|||..|....:.|..:...|.||.........|| :
  Rat   459 MGRTDDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPIRREVVKAFVVLAPEFLSHDQDQL 523

  Fly   489 VDYVETH---IDAKYKQLNGGAIIVEDLVRSPNGKTNRMANKA 528
            ...::.|   :.|.||.......:: ||.::..||..|...:|
  Rat   524 TKVLQEHVKSVTAPYKYPRKVEFVL-DLPKTITGKIERAKLRA 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11407NP_650831.1 CaiC 26..523 CDD:223395 111/541 (21%)
Firefly_Luc_like 47..522 CDD:213279 111/519 (21%)
Acsm2NP_653349.1 AFD_class_I 40..568 CDD:302604 118/563 (21%)
Acs 40..565 CDD:223442 117/561 (21%)
Coenzyme A binding. /evidence=ECO:0000250 469..471 0/1 (0%)
Coenzyme A binding. /evidence=ECO:0000250 540..542 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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