DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11407 and Acsl4

DIOPT Version :9

Sequence 1:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_006257376.1 Gene:Acsl4 / 113976 RGDID:69401 Length:711 Species:Rattus norvegicus


Alignment Length:627 Identity:131/627 - (20%)
Similarity:222/627 - (35%) Gaps:162/627 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PYRPASYYD--ADRKIWSGDQLEYYFDPHL-------SIG--EIIF--NEMRRHPQLIAQISATE 53
            |||..:::|  |...|...|.|:..||..:       |:|  ||:.  |||:.:.::..::....
  Rat    58 PYRSVTHFDSLAVIDIPGADTLDKLFDHAVAKFGKKDSLGTREILSEENEMQPNGKVFKKLILGN 122

  Fly    54 NTILTRAELQANAMHIASYMRSLGLLQMDIVGIIARNTTHISAVAYACF-FN------------G 105
            ...:...|:.....:..|.:.:|||...:.:.|...........|..|| :|            .
  Rat   123 YKWINYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGKE 187

  Fly   106 IAFHSLN---ISYEQSTIEKLFSITRPNIIFCDGDEFEKVRSATAQL---------DVKIITMRN 158
            ...|.||   .||..:::|.|.|               |:::|...:         |.|.|....
  Rat   188 AVVHGLNESEASYLITSVELLES---------------KLKAALLDINCVKHIIYVDNKTINRAE 237

  Fly   159 HPSG----SIR-IDQVLSTPIEKNFQPVRLEQGNDQTLAILCSSGTTGIPKAVTITNSRQILNSS 218
            :|.|    |:: ::::.|.|...:..|.| ...:|..: ::.:||:||.||.|.:.:|..|...:
  Rat   238 YPEGLEIHSMQSVEELGSKPENSSIPPSR-PTPSDMAI-VMYTSGSTGRPKGVMMHHSNLIAGMT 300

  Fly   219 ------HSLTTNDVQYSHSTLDWI---TGLLTTVTSGV---FSTKRIIADNIFD----------- 260
                  ..|...|....:..|..:   |..::..|.|.   :|:...::|....           
  Rat   301 GQCERIPGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSKGDCTV 365

  Fly   261 ---------PEFFMRL-------VEE-----------------HQITWIIQAPAHMAMMVNSPSF 292
                     ||...|:       |:|                 .||.....||....::......
  Rat   366 LKPTLMAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKA 430

  Fly   293 TTSDLSSLRYYLFGGSRASVETQHRIRSRLSKDCLHFAYGFTELGSMAALNLHFDEKPNSVGR-- 355
            ...  .::|..|.||:..|.:| ||..:......:...||.||......:....|.....||.  
  Rat   431 LLG--GNVRMMLSGGAPLSPQT-HRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPL 492

  Fly   356 LVAGLKLKVICEKGESL--GPDEVGELCLWNGQYWAGYYGNPEETHKMRDH------HNWFHTGD 412
            :...:|||...|.|.::  .|:..||:.:.......||:.|.|:|  ..|:      ..||.|||
  Rat   493 ICCEIKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKT--AEDYSVDENGQRWFCTGD 555

  Fly   413 LGYVDDDGFIYIVERKKDMLKFQNIMYYP-NEIESVISKMPDVVEVCVF---------------- 460
            :|....||.:.|::||||::|.|...|.. .::|:.:...|.:..:|.|                
  Rat   556 IGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQ 620

  Fly   461 -------------GVWNEI-NGDEATAAVVKKRGSALTAQDI 488
                         |.|.:| |.....|.::|:...|..|..:
  Rat   621 KKLTLLAQQKGVEGSWVDICNNPAMEAEILKEIREAANAMKL 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11407NP_650831.1 CaiC 26..523 CDD:223395 122/601 (20%)
Firefly_Luc_like 47..522 CDD:213279 114/569 (20%)
Acsl4XP_006257376.1 LC_FACS_euk1 121..696 CDD:341294 114/564 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342833
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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