DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11391 and acs-2

DIOPT Version :9

Sequence 1:NP_650830.1 Gene:CG11391 / 42353 FlyBaseID:FBgn0038732 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_506869.1 Gene:acs-2 / 3565680 WormBaseID:WBGene00009221 Length:618 Species:Caenorhabditis elegans


Alignment Length:541 Identity:133/541 - (24%)
Similarity:219/541 - (40%) Gaps:83/541 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GCSRHSLYNEELTVGQIIFRQLQRQPQRIFQISHTDNTRLTRFQMLQNAAKIGCYLRDQGFKKET 85
            |.|...|.||  |:||.:....:|.|.:.|.:......|.|..:...:..::...|...|.:| .
 Worm    50 GTSNIPLRNE--TLGQTLRNTTERVPDKEFCVFSKYPIRKTYEEFYHDVRQMAASLYTLGLEK-G 111

  Fly    86 DLVGLMARNSTHVGALAYGCLFNGTPFHAVNPNLEHNTISSLYKITRPRILCCDTADYEKIKDIG 150
            |.||:...|......|.|.|.|.|.....|||:..|..:..:.:.|..::|..... ::....:.
 Worm   112 DRVGVWGPNYYEWVVLQYACAFAGVIQVNVNPHYLHEELRFVMRKTGMKVLFAPKR-HKHSNYVH 175

  Fly   151 ASLGALIITVNGKLPGVISVADILQNPLP---------DDY------------------EPAQFQ 188
            ..|.|:.....|: ||   |..|..:.:|         ||.                  |.|:.:
 Worm   176 TMLEAMPEMRRGQ-PG---VGHIKSHDIPELRHIVLYGDDVPVHGAWVYSDLIHAAGSAERAKLE 236

  Fly   189 RGVDRTMA------ILCSSGTTGTPKAVTLSN---SRKLFEMHSYLGSDDVQY---APSTLDWLT 241
             .:||.:.      :..:|||||.||..||::   :...:.....||.|...:   .|:.|....
 Worm   237 -DMDRKLRPDEPVNMQFTSGTTGHPKGATLTHFGLNNNAYFAGIRLGWDREDHRICIPNPLYHCF 300

  Fly   242 G-LITLVTAAVFGTVRLISSEMFSTAHFLDICE--QHEVSWTIMANSHVAMLANCPKTSAQK--- 300
            | .:.::.|...|...:..|:.:   |..||.|  |:|...|:....  .|..:..|:...|   
 Worm   301 GCAVGVINAVNHGQTVVFPSKSY---HVPDIFEAIQNEKCTTMFGTP--TMFIDVLKSPLMKQFD 360

  Fly   301 LRSLKHLLFAGGHCLVATLKKMQSFLHGSGILRNAYGLTEVGTLVS---YNYDTQSKPTSVGRLM 362
            :.||:..:..|..|.:|..:||...:..:. ....||.||...||:   .:.|...:..|||.:|
 Worm   361 ISSLRGGVIGGAPCPMALCEKMVKEMRMTD-FSVIYGSTETSPLVTMSELHVDPFERIKSVGSVM 424

  Fly   363 ANIRVKIVDSSGQLQGPKGLGEILCHNGQPWS-------GYVGNPLAT--AEMRDSAGWYHTGDV 418
            .:..:.|||..| :..|.|.      .|:.||       ||..:...|  |..||.  ||.:||.
 Worm   425 PHQELAIVDEFG-VPVPTGA------KGELWSRGYSTMLGYWADHDKTNLAITRDR--WYKSGDT 480

  Fly   419 GYFDEDHYLHIVERKKDMLKYLGMMYYPHEVEEVIAQMPDVAEVCVFGIFRETEGDAAAASVVLR 483
            ...:||..::||.|.:||:...|...||.|:|:.:.::..||:..|.|:..:..|:...|.|.||
 Worm   481 ATMNEDGTINIVGRTRDMIVKGGENVYPTEIEQFLHKLDYVADAHVVGVPDDRYGENICAWVRLR 545

  Fly   484 --SGSKLDPKHVEQYVRKNVS 502
              ...|:..:|:::..::.::
 Worm   546 VEDEGKITAEHIKKACKRGMA 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11391NP_650830.1 CaiC 24..541 CDD:223395 131/538 (24%)
AFD_class_I 51..527 CDD:302604 122/511 (24%)
acs-2NP_506869.1 PRK08315 46..609 CDD:236236 133/541 (25%)
FACL_like_2 244..595 CDD:213284 88/338 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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