DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11391 and hll

DIOPT Version :9

Sequence 1:NP_650830.1 Gene:CG11391 / 42353 FlyBaseID:FBgn0038732 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:598 Identity:136/598 - (22%)
Similarity:226/598 - (37%) Gaps:144/598 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLDLNGNPATSY------DPVQKVWSGCSRHSLYNEELTVGQIIFRQLQRQ---PQRIFQISHTD 56
            |.||  .|||||      |.|:......|..|......|:.:......::.   |..:::...:.
  Fly     1 MNDL--KPATSYRSTSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSG 63

  Fly    57 N---TRLTRFQMLQNAAKIGCYLRDQGFKKETDLVGLMARNSTHVGALAYGCLFNGTPFHAVNPN 118
            |   |.||..:..:...:....|...|. :|...||::|.|........:|.|..|.....|.|:
  Fly    64 NDGWTTLTFGEYQERVEQAALMLLSVGV-EERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPS 127

  Fly   119 LEHNTISSLYKI--TRPRILCC--DTADYEKIKDIGASLGAL--IITVNGKLPGVISVADILQNP 177
               |:..:::.:  |....:|.  |.....|::.|...|..|  :|.::|.....:         
  Fly   128 ---NSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFV--------- 180

  Fly   178 LPDDYEPAQF--QRGVDRTMA---------------------ILCSSGTTGTPKAVTLSNSRKLF 219
               |:||..|  |:..::|.:                     ::.:|||.|.||||.||:...:|
  Fly   181 ---DHEPGYFSWQKLQEQTFSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVF 242

  Fly   220 EMHS--------YLGSDD-VQYAP------STLDWLTGL-----ITLVTA-AVFGTV-------- 255
            :..|        .:|.:. |.|.|      ...|...||     :|.... |:.||:        
  Fly   243 DTKSAAAHMQDIQVGKESFVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKAR 307

  Fly   256 ----------------RLISSE-------MFSTAHFLDICEQHEVSWTIMANSHVAMLANCPK-T 296
                            ||:::|       ....|.......:|:.  |:||....::..|... .
  Fly   308 PTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEHQT--TLMAGKSPSIYGNAKYWL 370

  Fly   297 SAQKLRSLKHLL--------FAGGHCLVATLKKMQSFLHGSGI-LRNAYGLTEVGTLVSYNYDTQ 352
            :.:.::.::.::        |.||   ..|.::::.|..|..| |...||::|....::.|.|. 
  Fly   371 ACRVVKPIREMIGVDNCRVFFTGG---APTSEELKQFFLGLDIALGECYGMSETSGAITLNVDI- 431

  Fly   353 SKPTSVGRLMANIRVKI--VDSSGQLQGPKGLGEILCHNGQPWSGYVGNPLATAEMRDSAGWYHT 415
            |...|.|:....:.:||  .|.:||       ||||......:.||:|.|..|.|.....||.|:
  Fly   432 SNLYSAGQACEGVTLKIHEPDCNGQ-------GEILMRGRLVFMGYLGLPDKTEETVKEDGWLHS 489

  Fly   416 GDVGYFDEDHYLHIVERKKDMLKYLGMMYYPH-EVEEVI-AQMPDVAEVCVFGIFRETEGDAAAA 478
            ||:||.|....|.|..|.|:::...|....|. .:||:| .::|.|:.|.:.|..|:      ..
  Fly   490 GDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIKKELPCVSNVLLIGDHRK------YL 548

  Fly   479 SVVLRSGSKLDPK 491
            :|:|...:|.|.|
  Fly   549 TVLLSLKTKCDAK 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11391NP_650830.1 CaiC 24..541 CDD:223395 125/569 (22%)
AFD_class_I 51..527 CDD:302604 122/539 (23%)
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 122/535 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452224
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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