DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11391 and Dip2c

DIOPT Version :9

Sequence 1:NP_650830.1 Gene:CG11391 / 42353 FlyBaseID:FBgn0038732 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_038951677.1 Gene:Dip2c / 307067 RGDID:1560155 Length:1626 Species:Rattus norvegicus


Alignment Length:624 Identity:136/624 - (21%)
Similarity:234/624 - (37%) Gaps:151/624 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EELTVGQIIFRQLQRQPQR----IFQISHTDNTRLTRFQMLQNAAKIGCYLRDQGFKKETDLVGL 90
            |.|.:.:::..:.|..|..    :.....|....||..|:.:.|.||...|.::|..::.|.|.|
  Rat  1028 EFLFLSEVLQWRAQTTPDHLLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVAL 1092

  Fly    91 MARNSTHVGALAYGCLFNG------TPFHAVNPNLEHNTISSLYKITRPRILCCDTADYEKIKDI 149
            :......:.|..||||:.|      .|.|..|......|:..:.:::|...|.......:.::..
  Rat  1093 VYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSR 1157

  Fly   150 GASLGALIITVNGKLPGVISVADILQNPLPDDYEPAQFQRGVDRTMAIL-CSSGTTGTPKAVTLS 213
            .|:....:.|    .|.::...|:.:......|:|:.     ..|:|.| .|..|||....|.:|
  Rat  1158 EAAAAVDVRT----WPLILDTDDLPKKRPAQIYKPSN-----PDTLAYLDFSVSTTGMLAGVKMS 1213

  Fly   214 N--------SRKLFEMHSYLGSDDVQYAPS-----TLDWLTGL--ITLVTAAVFG---TVRLISS 260
            :        |.||          ..:..||     .||...||  :.....:|:.   ::.:..|
  Rat  1214 HAATSAFCRSIKL----------QCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPS 1268

  Fly   261 EM-FSTAHFLDICEQHEVSWTIMANSHVAMLANCPKTSAQKLRSLKHLLFAGG-------HCLVA 317
            |: .:.|.:|....|::|..|..:.|   ::..|.|....:..|||    |.|       .|:|.
  Rat  1269 ELETNPALWLLAVSQYKVRDTFCSYS---VMELCTKGLGSQTESLK----ARGLDLSRVRTCVVV 1326

  Fly   318 TLKK-----MQSF--------LHGSGILRNAYG----------------LTEVGT---------- 343
            ..::     .|||        ||...: ..::|                |.|.||          
  Rat  1327 AEERPRIALTQSFSKLFKDLGLHPRAV-STSFGCRVNLAICLQPHRLWTLAEQGTSGPDPTTVYV 1390

  Fly   344 -LVSYNYD-----TQSKPTSV-----GRLMANIRVKIVDSSGQLQGPKG---LGEILCHNGQPWS 394
             :.:..:|     .:..|.|:     |:::..:|  |:.::.:.:||.|   ||||..|:....|
  Rat  1391 DMRALRHDRVRLVERGSPHSLPLMESGKILPGVR--IIIANPETKGPLGDSHLGEIWVHSAHNAS 1453

  Fly   395 GY---VGNPLATAE---MRDSAG-----WYHTGDVGYF---------DEDH-YLHIVERKKDMLK 438
            ||   .|:....::   .|.|.|     |..||.:|:.         .|.| .|::|....:.::
  Rat  1454 GYFTIYGDESLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAME 1518

  Fly   439 YLGMMYYPHEVE-EVIAQMPDVAEVCVFGIFRETEGDAAAASVVLRSGSKLDPKHVEQYVRKNVS 502
            ..||.|:|.::| .||.....|.|..||     |..:.....|.| .||:.:...:...| .||.
  Rat  1519 LRGMRYHPIDIETSVIRAHKSVTECAVF-----TWTNLLVVVVEL-DGSEQEALDLVPLV-TNVV 1576

  Fly   503 VQFKHLHGGVQFVPQLAK---SANGKVNRQAVKAAYLRD 538
            ::..:|..||..|..:..   ::.|:..|..::..:|.|
  Rat  1577 LEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRDGFLAD 1615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11391NP_650830.1 CaiC 24..541 CDD:223395 136/624 (22%)
AFD_class_I 51..527 CDD:302604 129/586 (22%)
Dip2cXP_038951677.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1622 CDD:341231 132/604 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.