DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acsx1R and Fatp3

DIOPT Version :10

Sequence 1:NP_650829.1 Gene:Acsx1R / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster


Alignment Length:611 Identity:122/611 - (19%)
Similarity:222/611 - (36%) Gaps:163/611 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGLIGRNTTHMLAVAYACF 102
            :.||.|:.|..:  .:...|:..|.|..:.::|.|....||.:.|.|.|:...     .:.|.|.
  Fly   122 QARRRPKKTCFV--MDDRHLSFAEALEFSQKIAGYFSDRGLERGDCVALLMET-----RLEYPCI 179

  Fly   103 FNGIA-----FHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPLD 162
            :.|::     ...:|.....:::....||.....:.. |.|.         |||.:.......||
  Fly   180 WLGLSQLGVITALINSNLRGESLLHSIKVANAKALIV-GSEL---------LDVLVSLREKEQLD 234

  Fly   163 SIKI---------------------DEVVATPIEENFQ-PAKLEKGNDQT-LAILCSSGTTGTPK 204
            .:.|                     |.|.|...::..: |:.:..|..:: |..:.:|||||.||
  Fly   235 EVPIYQYTDDEVRGVAGHDLLPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGTTGLPK 299

  Fly   205 AVTITNSRHIL--AGNYH---LTTADVQYSHNTLDWITGLLTTITSGVFSTTRIIADNAFDPAFA 264
            |..|||.|.:.  ||:|:   :::.||.|....|....|.:..:.:.:.:.:.::....|     
  Fly   300 AAVITNLRFLFMSAGSYYMLKMSSDDVVYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKF----- 359

  Fly   265 LRIIEEYKVTWTIQPPSSMALMINCPDFETCDLS----------------------SLRCYMFGG 307
                            |:....::| |...|.::                      :||.....|
  Fly   360 ----------------SARNFWLDC-DRHNCTVAQYIGELCRYLLATSYSPDQQKHNLRLMYGNG 407

  Fly   308 SRAALEVQKGIRSRLSHNCLQFVYGFTELGAMATINCHFDEKTGSVGQL-VNGLKM----KIKND 367
            .|..:..|...|..:.|  :..:||.|| |....||  ...:.|::|.: |.|..:    .::.|
  Fly   408 LRPQIWSQFVRRFGIPH--IGEIYGATE-GNSNLIN--ITNRVGAIGFVPVYGSSLYPVQVLRCD 467

  Fly   368 D--GESLGPDEIGEVCIMNNQHWSGYYGNEVETRNMRDSLGWY---------------------- 408
            :  ||.| .|..|. ||......:|....:|:.|....:...|                      
  Fly   468 EYTGELL-KDSKGH-CIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDVFF 530

  Fly   409 HSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIW-SNIFGDEAA 472
            :|||:...|..|:.|..||..:..:::.......::|::|:....:.:..|:|:. .::.|....
  Fly   531 NSGDMVVRDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGM 595

  Fly   473 AAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGAV---------IVDDLQRSANGKTNR--MAN 526
            ||:|     :.|.:..:||:.       ..|.|...         ::|::.|:|..|..:  :|.
  Fly   596 AAIV-----DPERKVDMDYLS-------VVLRGSLPPYARPLFIRLLDEIPRTATFKLKKRELAK 648

  Fly   527 KAHF-------LHLKNRKNIL--LSQ 543
            :|:.       ::..||..|.  |||
  Fly   649 EAYDIGQLSDPIYYLNRDGIYRPLSQ 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acsx1RNP_650829.1 Firefly_Luc_like 47..522 CDD:341237 110/568 (19%)
Fatp3NP_726437.2 hsFATP4_like 136..653 CDD:341262 112/572 (20%)

Return to query results.
Submit another query.