DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11659 and Acsm5

DIOPT Version :9

Sequence 1:NP_650829.1 Gene:CG11659 / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_001014184.3 Gene:Acsm5 / 361637 RGDID:1309578 Length:578 Species:Rattus norvegicus


Alignment Length:398 Identity:87/398 - (21%)
Similarity:162/398 - (40%) Gaps:81/398 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 VATPIEENFQPAKLEKGNDQTLAILCSSGTTGTPKAVT----------ITNSRHILAGNYHLTTA 224
            ||:| |.|.    |...:..::||..:||||||||.|.          :.:.|.::|    ||.:
  Rat   208 VASP-EHNC----LRTRSGDSMAIYFTSGTTGTPKMVEHSQCSYGLGFVASGRRLMA----LTES 263

  Fly   225 DVQYSHNTLDWITGLLTTITSGVFSTTRIIAD-NAFDPAFALRIIEEYKVTWTIQPPSSMALMIN 288
            |:.::.....|:....|..::........:.: ...|....|..:..:.:|.....|:...|::.
  Rat   264 DIFWNTTDTGWVKAAWTLFSAWANGACVFVHELPQVDAQTILNTLCRFPITTICCVPTLFRLLVQ 328

  Fly   289 CPDFETCDLSSLRCYMFGG------------SRAALEVQKGIRSRLSHNCLQFVYGFTELGAM-- 339
             .|........||..:.||            ::..||:.:|             ||.:|...:  
  Rat   329 -EDLTRYKFQCLRHCLAGGEALNSDVRDKWKNQTGLEIHEG-------------YGQSETVLICG 379

  Fly   340 ----ATINCHFDEKTGSVGQLVNGLKMKIKNDDGESLGPDEIGEV----------CIMNNQHWSG 390
                :||      |:||:|:......::|.:::|..|.|.:.|.:          |:.|     .
  Rat   380 NFRGSTI------KSGSMGKASPPYDVQIVDEEGNVLPPGKEGNIAIRIKPTRPFCLFN-----C 433

  Fly   391 YYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVA 455
            |..|..:|...... .:|.:||..:||.||:.:.:.|..:::...:....|.::||.::|.|.|.
  Rat   434 YLDNPEKTAASEQG-DFYITGDRAHMDEDGYFWFVGRNDDVINSSSYRIGPVEVESALAEHPAVL 497

  Fly   456 EVCVFGIWSNIFGDEAAAAVVKK---LGSELEA--QDVVDYVRSRTDSKYKQLNGGAVIVDDLQR 515
            |..|......|.|:...|.:|..   :..:.||  :::.::|::.| :.||.....| .:.:|.:
  Rat   498 ESAVVSSPDPIRGEVVKAFIVLSPAYVSHDPEALTRELQEHVKTVT-APYKYPRKVA-FISELPK 560

  Fly   516 SANGKTNR 523
            :.:||..|
  Rat   561 TVSGKILR 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11659NP_650829.1 CaiC 26..523 CDD:223395 86/396 (22%)
AFD_class_I 47..522 CDD:302604 86/395 (22%)
Acsm5NP_001014184.3 AFD_class_I 48..576 CDD:418409 87/398 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.