DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acsx1R and Acsbg3

DIOPT Version :10

Sequence 1:NP_650829.1 Gene:Acsx1R / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_001406418.1 Gene:Acsbg3 / 316124 RGDID:1595856 Length:705 Species:Rattus norvegicus


Alignment Length:543 Identity:107/543 - (19%)
Similarity:199/543 - (36%) Gaps:137/543 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPDLSIGEIIFHEMRRHPQLTAQISATEGT--VLTRGELLANAMRLASYMRSLGLLQSDIVGLIG 88
            :|.:::.::|.....::....|..|..:.:  |||..|......|.|.....:||.:...||::|
  Rat    70 EPPVTVPDLIMSAATKYSHYLAIGSKYKKSWQVLTYIEYYEACRRAAKAFLKVGLERFHGVGIMG 134

  Fly    89 RNTTH-MLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGD-EFEKVRSATAEL-D 150
            .|::. ::|...|....||:...|:....: ..:.|.:.:...|...|.| :.:||......| .
  Rat   135 INSSEWVIASIGAIMAGGISVGILSSNSPK-ACQIIAETSEMDIFVVDNDRQLQKVNQIQGYLKH 198

  Fly   151 VKIVTMRNHPLDSI--------------------KIDEVVATPIEENFQPAKLEKGNDQTLAILC 195
            :|.:......:..:                    |:|:::           ..:|.| |..|::.
  Rat   199 LKAIIQYREDIQEVQPNLYSWKGFLDLADGISDEKLDQII-----------DAQKPN-QCCALVY 251

  Fly   196 SSGTTGTPKAVTIT---------------------NSRHILAGNYHLTTADVQYSHNTLD-WI-- 236
            :.||||.|||:.::                     :.:.||.....|..|.:|    .|| |:  
  Rat   252 NQGTTGNPKAIMLSHDNITWTTAATVQSLGYKCPPHGQEILVSYLPLCFAGIQ----ILDVWVAI 312

  Fly   237 ----TGLLTTITSGVFSTTRIIADNAFDPAFALRIIEEYKVT--------WTIQPPSSMALMINC 289
                |....::.||.:|....::..    .|.:.::.|.:.|        |.....|.....::.
  Rat   313 SVAGTVYFPSLESGKWSGLPRVSGT----GFLMELLREVQPTTFCGIPWVWDRMLDSLKTKHLDS 373

  Fly   290 PDFE--------TCDLSSLRCYMFGGSRAALEVQKGIRSRLS----------HNCLQF------- 329
            ..|.        ...||:.:..|.||....|..  |:..||:          ::|.||       
  Rat   374 TAFRRKIDRWAMRMGLSTNKRQMMGGIHQPLCF--GLAKRLTFKPAKKFLGLNHCEQFLNVGMGL 436

  Fly   330 -----------------VYGFTELGAMATINCHFDEKTGSVGQLV--NGLKMKIKNDDGESLGPD 375
                             :||.:|...:.|::.....:..|.|:.:  ...|::.:|.||      
  Rat   437 PRSTLDFFLSMNIPILELYGLSECTGLHTLSSLQAYRILSSGKALPKTHTKVEKENQDG------ 495

  Fly   376 EIGEVCIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQN-IMY 439
             :|.:||.....:.||..::..|....|:.||.|:.|||::|.|.:||:.....::::..: .|.
  Rat   496 -VGNLCIWGRHVFMGYLRDKHSTERKVDNHGWLHTNDLGFLDFDKYLYVTGNTNDLIRLNSGEMV 559

  Fly   440 YPNDIES-VISEMPQVAEVCVFG 461
            .|..||. |.:.:|.|....:.|
  Rat   560 NPIPIEERVRTRIPLVRYAMLVG 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acsx1RNP_650829.1 Firefly_Luc_like 47..522 CDD:341237 105/522 (20%)
Acsbg3NP_001406418.1 ACSBG_like 95..700 CDD:341256 103/518 (20%)

Return to query results.
Submit another query.