DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11659 and Acsl1

DIOPT Version :9

Sequence 1:NP_650829.1 Gene:CG11659 / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:465 Identity:111/465 - (23%)
Similarity:170/465 - (36%) Gaps:111/465 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VGLIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKV------ 142
            :|:..:|....:.:...||...:....|..|...|.|..|......|:||.|..|..|:      
  Rat   151 IGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFADKPEKAKLLLEGVE 215

  Fly   143 RSATAELDVKIVTMRNHPLDSIK------IDEVVATPIEE--NFQPAKLEKGNDQTLAILC-SSG 198
            ...|..|.: ||.|.::..|.::      ::.:....:|:  .....|.:....:.|||:| :||
  Rat   216 NKLTPCLKI-IVIMDSYDNDLVERGQKCGVEIIGLKALEDLGRVNRTKPKPPEPEDLAIICFTSG 279

  Fly   199 TTGTPKAVTIT--NSRHILAGNYHLTTA-------DVQYSHNTLDWITGLLTTITS--------- 245
            |||.||...:|  |..:..:|....|.:       ||..|...|   ..:..|:..         
  Rat   280 TTGNPKGAMVTHQNIMNDCSGFIKATESAFIASPEDVLISFLPL---AHMFETVVECVMLCHGAK 341

  Fly   246 -GVF-STTRIIADNAFDPAFALRIIEEYKVTWTIQP--PSSMALMINCPDFETCDLSSLRCYM-F 305
             |.| ...|::.|:       |::::.     ||.|  |..:..|.: ..|...:.|..|..: |
  Rat   342 IGFFQGDIRLLMDD-------LKVLQP-----TIFPVVPRLLNRMFD-RIFGQANTSVKRWLLDF 393

  Fly   306 GGSRAALEVQKGI---------------------RSRL--------SHNCLQFV----------- 330
            ...|...|::.||                     :.||        |...|.|:           
  Rat   394 ASKRKEAELRSGIVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRAALGCQFYEG 458

  Fly   331 YGFTELGAMATINCHFDEKTGSVG--------QLVNGLKMKIKNDDGESLGPDEIGEVCIMNNQH 387
            ||.||..|...::...|...|.||        :||:...|..:...||       ||||:.....
  Rat   459 YGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVEDMNYQAAKGE-------GEVCVKGANV 516

  Fly   388 WSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYY-PNDIESVISEM 451
            :.||..:...|....|..||.|:||:|....:|.|.|:||||.:.|.....|. |..||::....
  Rat   517 FKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRS 581

  Fly   452 PQVAEVCVFG 461
            ..||:|.|.|
  Rat   582 EAVAQVFVHG 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11659NP_650829.1 CaiC 26..523 CDD:223395 111/465 (24%)
AFD_class_I 47..522 CDD:302604 111/465 (24%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 111/465 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342966
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.