DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11659 and Acsm3

DIOPT Version :9

Sequence 1:NP_650829.1 Gene:CG11659 / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_006230168.1 Gene:Acsm3 / 24763 RGDID:62086 Length:581 Species:Rattus norvegicus


Alignment Length:376 Identity:88/376 - (23%)
Similarity:164/376 - (43%) Gaps:64/376 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 NDQTLAILCSSGTTGTPKAVTITNSRHILA----GNY--HLTTADVQYSHNTLDWITGLLTTITS 245
            :::.:||..:|||||.||.:..|:|...|.    |.:  .|..:||.:  ||.|  ||...:..|
  Rat   220 HNELMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIASDVMW--NTSD--TGWAKSAWS 280

  Fly   246 GVFST----TRIIAD--NAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDLSSLRCYM 304
            .|||.    ..:.|.  ..||....|:.:.::.:|.....|::..::|......:...:||:..:
  Rat   281 SVFSPWTQGACVFAHYLPRFDSTSILQTLSKFPITVFCSAPTAYRMLIQNDITRSYKFNSLKHCV 345

  Fly   305 FGG------------SRAALEVQKGIRSRLSHNCLQFVYGFTELGAMATINC-HFDE---KTGSV 353
            ..|            .:..|::.:|             ||.||    ..:.| :|..   |.||:
  Rat   346 SAGEPINPEVMEQWKKKTGLDIYEG-------------YGQTE----TVLICGNFKGMKIKPGSM 393

  Fly   354 GQLVNGLKMKIKNDDGESLGPDEIGEVCIMNNQH-----WSGYYGNEVETRN-MRDSLGWYHSGD 412
            |:......::|.:::|..|.|.:.|::.:.....     ::.|..|..:|.: :|.:  :|.:||
  Rat   394 GKPSPAFNVEILDENGTILPPGQEGDIAVQVLPDRPFGLFTHYVDNPSKTASTLRGN--FYITGD 456

  Fly   413 LGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVK 477
            .||||.||:.:.:.|..:::........|.::||.:.|.|.:||..|......|.|:...|.:|.
  Rat   457 RGYMDEDGYFWFVARSDDVILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKAFIVL 521

  Fly   478 KLGSELEAQ-----DVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNR 523
            ....:|..|     ::.::|: :|.:.||... ....:::|.::.:||..|
  Rat   522 NPDYKLHDQEQLKKEIQEHVK-KTTAPYKYPR-KIEFIEELPKTVSGKVKR 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11659NP_650829.1 CaiC 26..523 CDD:223395 87/374 (23%)
AFD_class_I 47..522 CDD:302604 87/373 (23%)
Acsm3XP_006230168.1 Acs 45..575 CDD:223442 88/376 (23%)
AFD_class_I 48..578 CDD:302604 88/376 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.