DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11659 and Acsm2

DIOPT Version :9

Sequence 1:NP_650829.1 Gene:CG11659 / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_001171448.1 Gene:Acsm2 / 233799 MGIID:2385289 Length:600 Species:Mus musculus


Alignment Length:501 Identity:105/501 - (20%)
Similarity:198/501 - (39%) Gaps:85/501 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 GLLQSDIVGLIGRNTTHMLAVAYACFFNGIAFHSLNITY-DRDTIEKIYKVTRPSIIFCDGDEFE 140
            ||.:.|.|.::.........:...|...|:.|....|.. ..|.:.::......:|:  .|||..
Mouse   127 GLHRGDRVAVVLPRIPEWWLMILGCMRTGLVFMPGTIQMRSSDILYRLQASKARAIV--AGDEVA 189

  Fly   141 KVRSATAE----LDVKIVTMRNHPLDSIKIDEVV--ATPIEENFQPAKLEKGNDQTLAILCSSGT 199
            :...|.|.    |.:|::...|.....:....::  |:.|.:     .:|..:.::.||..:|||
Mouse   190 QEVDAVAPDCSFLKIKLLVSENSREGWLNFKALLKEASTIHQ-----CVETESRESAAIYFTSGT 249

  Fly   200 TGTPKAVTITNSRHILAGNYH----------------LTTADVQYSHNTLDWITGLLTTITSGVF 248
            :|.||          :|.:.|                |:|:|:.::.:...||..:|     |.|
Mouse   250 SGPPK----------MAEHSHCSLGIKAKMDAASWTGLSTSDIIWTISDTAWIMNIL-----GAF 299

  Fly   249 STTRIIAD-------NAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDLSSLR----- 301
            ....::..       ..||....|:::..|.:...:..|....:::.      .||||.:     
Mouse   300 LEPWVLGACIFVHLLPKFDSQTVLKVLSSYPINTLVGAPIIYRMLLQ------QDLSSYKFPHLH 358

  Fly   302 -CYMFGGSRAALEVQKGIRSRLSHNCLQFVYGFTELGAMATINCHFDEKTGSVGQLVNGLKMKIK 365
             |:. ||.....|..:..:::.... ::.:||.||.|.:..::.....|.|.:|.......:::.
Mouse   359 SCFS-GGETLLPETLENWKAKTGLE-IREIYGQTETGLICRVSRTMKVKPGYLGTAFAHYDVQVI 421

  Fly   366 NDDGESLGPDEIGEVCIMNNQHW-----SGYYGNEVETR-NMRDSLGWYHSGDLGYMDRDGFLYI 424
            ::.|..|.|.:.|::.|.....|     |||..|..:|: |:|... |. .||.|..|.:|:.:.
Mouse   422 DEQGNVLPPGKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRGDF-WL-MGDRGIKDPEGYFHF 484

  Fly   425 MDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQD-- 487
            :.|..:::........|:::|:.:.|.|.|:|..|........|:...|.||  |..|..:.|  
Mouse   485 IGRSDDIINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVV--LAPEFLSHDRD 547

  Fly   488 -----VVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNRMANKA 528
                 :.::|:|.| :.||.......:: ||.::..||..|...:|
Mouse   548 QLTKVLQEHVKSVT-APYKYPRKVEFVL-DLPKTVTGKIERAKLRA 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11659NP_650829.1 CaiC 26..523 CDD:223395 103/494 (21%)
AFD_class_I 47..522 CDD:302604 103/493 (21%)
Acsm2NP_001171448.1 Acs 65..591 CDD:223442 104/499 (21%)
AFD_class_I 66..594 CDD:302604 105/501 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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