DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11659 and Acsl4

DIOPT Version :9

Sequence 1:NP_650829.1 Gene:CG11659 / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_006257376.1 Gene:Acsl4 / 113976 RGDID:69401 Length:711 Species:Rattus norvegicus


Alignment Length:606 Identity:120/606 - (19%)
Similarity:228/606 - (37%) Gaps:170/606 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ELLANAMRLASYMRSLGLLQSDIVGLIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTI----- 120
            |:........|.:.:|||...:.:.:........:..|..||.......:|..|..::.:     
  Rat   130 EVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGKEAVVHGLN 194

  Fly   121 --EKIYKVTRPSIIFCDGDEFEKVRSATAEL---------DVKIVTMRNHP----LDSIK-IDEV 169
              |..|.:|...::      ..|:::|..::         |.|.:....:|    :.|:: ::|:
  Rat   195 ESEASYLITSVELL------ESKLKAALLDINCVKHIIYVDNKTINRAEYPEGLEIHSMQSVEEL 253

  Fly   170 VATPIEENFQPAKLEKGNDQTLAILCSSGTTGTPKAVTITNSRHILAG---------------NY 219
            .:.|...:..|:: ...:|..: ::.:||:||.||.|.:.:| :::||               .|
  Rat   254 GSKPENSSIPPSR-PTPSDMAI-VMYTSGSTGRPKGVMMHHS-NLIAGMTGQCERIPGLGPKDTY 315

  Fly   220 --HLTTADVQYSHNTLDWITGLLTTITSGV---FSTTRIIADNAFDPAFALRIIEEYKVTWTIQP 279
              :|..|.|      |: :|..::..|.|.   :|:...::|.      :.:|.:..|...|:..
  Rat   316 IGYLPLAHV------LE-LTAEISCFTYGCRIGYSSPLTLSDQ------SSKIKKGSKGDCTVLK 367

  Fly   280 PSSMALMINCPD-------FETCDLSSLRCYMF--GGSRAALEVQKG------------------ 317
            |:.||.:....|       .:..:::.::..:|  |......:::||                  
  Rat   368 PTLMAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKALL 432

  Fly   318 ---IRSRLS---------HNCLQFV--------YGFTELGAMATINCHFDEKTGSVGQLVNGLKM 362
               :|..||         |..:...        ||.||.....|:....|..||.||..:...::
  Rat   433 GGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEI 497

  Fly   363 KIKN--DDGESL--GPDEIGEVCIMNNQHWSGYYGNEVETRN--MRDSLG--WYHSGDLGYMDRD 419
            |:|:  :.|.::  .|:..||:.|.......||:.||.:|..  ..|..|  |:.:||:|....|
  Rat   498 KLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPD 562

  Fly   420 GFLYIMDRKKEMLKYQNIMYYP-NDIESVISEMPQVAEVCVF----------------------- 460
            |.|.|:||||:::|.|...|.. ..:|:.:...|.:..:|.|                       
  Rat   563 GCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLA 627

  Fly   461 ------GIWSNIFGDEA-AAAVVKKL-----GSELEAQDVVDYVRSR-----------TDS---K 499
                  |.|.:|..:.| .|.::|::     ..:||..::...||..           ||:   |
  Rat   628 QQKGVEGSWVDICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKLK 692

  Fly   500 YKQLNGGAVIVDDLQRSANGK 520
            .|:|...  .:.|::|...||
  Rat   693 RKELKNH--YLKDIERMYGGK 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11659NP_650829.1 CaiC 26..523 CDD:223395 120/606 (20%)
AFD_class_I 47..522 CDD:302604 120/606 (20%)
Acsl4XP_006257376.1 LC_FACS_euk1 121..696 CDD:341294 115/587 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342831
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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