DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and Slc27a1

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_006253015.1 Gene:Slc27a1 / 94172 RGDID:620927 Length:649 Species:Rattus norvegicus


Alignment Length:605 Identity:126/605 - (20%)
Similarity:215/605 - (35%) Gaps:155/605 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EMRRH------------------PQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIV 84
            |:|||                  |:..|.:.|:.|...|..:|...:..:|:....||....|:|
  Rat    70 ELRRHRRAGDTIPRIFQAVAQRQPERLALVDASSGICWTFAQLDTYSNAVANLFLQLGFAPGDVV 134

  Fly    85 GIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTI-----------------------EKIYKV 126
            .:........:.:.......|:....||:...|:.:                       |...::
  Rat   135 AVFLEGRPEFVGLWLGLAKAGVVAALLNVNLRREPLAFCLGTSAAKALIYGGEMAAAVAEVSEQL 199

  Fly   127 TRPSIIFCDGD-EFEKVRSATAELDVKIVTMRNHPLDSIKIDEVVATPIEENFQPAKLEKGNDQT 190
            .:..:.||.|| ..|.|...|..||         |:    :.|...||:.:  .|.   ||.|..
  Rat   200 GKSLLKFCSGDLGPESVLPDTQLLD---------PM----LAEAPTTPLAQ--APG---KGMDDR 246

  Fly   191 LAILCSSGTTGTPKAVTITNSRH--ILAGNYH---LTTADVQYS----HNTLDWITGL------- 239
            |..:.:|||||.|||..:.:||:  |.|..:|   :...||.|.    :::...|.|:       
  Rat   247 LFYIYTSGTTGLPKAAIVVHSRYYRIAAFGHHSYSMRANDVLYDCLPLYHSAGNIMGVGQCIIYG 311

  Fly   240 LTTITSGVFSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYM 304
            ||.:....||.:|...|           ..:|..|...........::..|..:......:|..:
  Rat   312 LTVVLRKKFSASRFWDD-----------CVKYNCTVVQYIGEICRYLLRQPVRDVERRHHVRLAV 365

  Fly   305 FGGSRAAL----EVQKGIRSRLSHDCLQFVYGFTELGAMATINC---HFDEKTGSVG------QL 356
            ..|.|.|:    ..:.|:|.      :...||.||      .||   :.|.|.||.|      ..
  Rat   366 GNGLRPAIWEEFTQRFGVRQ------IGEFYGATE------CNCSIANMDGKVGSCGFNSRILTH 418

  Fly   357 VNGLKMKIINDD-----GESLG------PDEIGEVCIMNNQ-----HWSGYYGNEVETRNMRDSL 405
            |..:::..:|:|     .:|.|      |.|.|.:....||     .:.||..:....:.:..|:
  Rat   419 VYPIRLVKVNEDTMEPLRDSQGLCIPCQPGEPGLLVGQINQQDPLRRFDGYVSDSATNKKIAHSV 483

  Fly   406 -----GWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGI-WS 464
                 ..|.|||:..||..|::|..||..:..:::.......::|:|:|.:....:|.|:|: ..
  Rat   484 FRKGDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEAVLSRLLGQTDVAVYGVAVP 548

  Fly   465 NIFGDEAAAAVV--------KKLGSELE------AQDVVDYVRSRTDSKYKQLNGGAVIVDDLQR 515
            .:.|....||:.        ..:..||:      ||.:...:..:.|:.      |...:...:.
  Rat   549 GVEGKAGMAAIADPHNQLDPNSMYQELQKVLASYAQPIFLRLLPQVDTT------GTFKIQKTRL 607

  Fly   516 SANGKTNRM-ANKAYFLHLK 534
            ...|...|. :::.:||.||
  Rat   608 QREGFDPRQTSDRLFFLDLK 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 121/591 (20%)
AFD_class_I 47..522 CDD:302604 116/563 (21%)
Slc27a1XP_006253015.1 PRK08279 45..649 CDD:236217 126/605 (21%)
AFD_class_I 107..614 CDD:302604 113/553 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342881
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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