DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and PCS60

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_009781.3 Gene:PCS60 / 852523 SGDID:S000000426 Length:543 Species:Saccharomyces cerevisiae


Alignment Length:443 Identity:108/443 - (24%)
Similarity:178/443 - (40%) Gaps:62/443 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 AVAYACFFNGIAFHS--LNITYDRDTIEKIYKVTRPSIIFCDGDEFEKV--RSATAELDVKIVTM 156
            |..:.||...:||.:  ..:.||               |:...|.:::|  ||..   :.|.|  
Yeast   131 ASTFGCFIVELAFDATRFRVEYD---------------IYSPEDNYKRVIYRSLN---NAKFV-- 175

  Fly   157 RNHPLDSIKIDEVVATPIEENFQPAK---LEKGNDQTLAILCSSGTTGTPKAV-----TITNSRH 213
                                |..|.|   ..:.:|..| ||.:||||.|||.|     .|..|..
Yeast   176 --------------------NTNPVKFPGFARSSDVAL-ILHTSGTTSTPKTVPLLHLNIVRSTL 219

  Fly   214 ILAGNYHLTTADVQYSHNTLDWITGLLTTITSGVFSTTRIIADNAFDPAFALRIIEEYKVTWTIQ 278
            .:|..|.||..|..|....|..:.||:..:.|...:...::..:.|.|........:|...|...
Yeast   220 NIANTYKLTPLDRSYVVMPLFHVHGLIGVLLSTFRTQGSVVVPDGFHPKLFWDQFVKYNCNWFSC 284

  Fly   279 PPSSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATIN 343
            .|:...:|:|.|  :......:|......|..|......:....:...|: .|..||.....|.|
Yeast   285 VPTISMIMLNMP--KPNPFPHIRFIRSCSSALAPATFHKLEKEFNAPVLE-AYAMTEASHQMTSN 346

  Fly   344 --CHFDEKTGSVGQLVNGLKMKIINDDGESLGPDEIGEVCIMNNQHWSGYYGN-EVETRNMRDSL 405
              .....|.|:||| ..|:.:.|::|:...|.|.::|||.|.......||..| :....|.....
Yeast   347 NLPPGKRKPGTVGQ-PQGVTVVILDDNDNVLPPGKVGEVSIRGENVTLGYANNPKANKENFTKRE 410

  Fly   406 GWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDE 470
            .::.:||.||.|.:|||.:..|.||::........|.:::.::...|::.|...||:..:::|..
Yeast   411 NYFRTGDQGYFDPEGFLVLTGRIKELINRGGEKISPIELDGIMLSHPKIDEAVAFGVPDDMYGQV 475

  Fly   471 AAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNR 523
            ..||:|.|.|.::..:::|::::....| :| :......||.|.::|.||..|
Yeast   476 VQAAIVLKKGEKMTYEELVNFLKKHLAS-FK-IPTKVYFVDKLPKTATGKIQR 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 107/441 (24%)
AFD_class_I 47..522 CDD:302604 107/440 (24%)
PCS60NP_009781.3 FACL_fum10p_like 18..531 CDD:341249 108/443 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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