DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and LYS2

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_009673.1 Gene:LYS2 / 852412 SGDID:S000000319 Length:1392 Species:Saccharomyces cerevisiae


Alignment Length:603 Identity:117/603 - (19%)
Similarity:216/603 - (35%) Gaps:168/603 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHS 110
            |..:::.:....|..::...:..:|.|:...|:.:.|:|.|.......::.........|..|..
Yeast   259 TPTLNSDKSRSFTYRDINRTSNIVAHYLIKTGIKRGDVVMIYSSRGVDLMVCVMGVLKAGATFSV 323

  Fly   111 LNITYD--RDTIEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPLDSI-KIDEVVAT 172
            ::..|.  |.||  ...|.:|..:.        |..|..:||..:....|..|:.: :|:.:.  
Yeast   324 IDPAYPPARQTI--YLGVAKPRGLI--------VIRAAGQLDQLVEDYINDELEIVSRINSIA-- 376

  Fly   173 PIEEN--FQPAKLEKGND----------------------QTLAILCSSGTTGTPKAVTITNSRH 213
             |:||  .:..||:.|.|                      .||:.  :||:.|.||.|.   .||
Yeast   377 -IQENGTIEGGKLDNGEDVLAPYDHYKDTRTGVVVGPDSNPTLSF--TSGSEGIPKGVL---GRH 435

  Fly   214 I--------LAGNYHLTTAD-----VQYSHNTL--DWITGLLTTITSGVFSTTRIIADNAFDPAF 263
            .        ::..::||..|     ...:|:.:  |..|.|.  :.:.::..|:   |:...|..
Yeast   436 FSLAYYFNWMSKRFNLTENDKFTMLSGIAHDPIQRDMFTPLF--LGAQLYVPTQ---DDIGTPGR 495

  Fly   264 ALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYMFGG----SRAALEVQKGIRSRLSH 324
            ....:.:|..|.|...| :|..::...  .|.....|....|.|    .|..|.:|     .|:.
Yeast   496 LAEWMSKYGCTVTHLTP-AMGQLLTAQ--ATTPFPKLHHAFFVGDILTKRDCLRLQ-----TLAE 552

  Fly   325 DC-LQFVYGFTELGAMATINCHFDEKTGS--------------VGQLVNGLKMKII--NDDGESL 372
            :| :..:||.||.....:   :|:.|:.:              .|:.:..:::.::  ||..:..
Yeast   553 NCRIVNMYGTTETQRAVS---YFEVKSKNDDPNFLKKLKDVMPAGKGMLNVQLLVVNRNDRTQIC 614

  Fly   373 GPDEIGEVCI--------------------MNN-----QHWSGYYGNEVETRN----------MR 402
            |..||||:.:                    :||     .||     |.::..|          .|
Yeast   615 GIGEIGEIYVRAGGLAEGYRGLPELNKEKFVNNWFVEKDHW-----NYLDKDNGEPWRQFWLGPR 674

  Fly   403 DSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAE----------- 456
            |.|  |.:||||....:|......|..:.:|.:.......:|::.||:.|.|.|           
Yeast   675 DRL--YRTGDLGRYLPNGDCECCGRADDQVKIRGFRIELGEIDTHISQHPLVRENITLVRKNADN 737

  Fly   457 ---VCVFGI------------WSNIFGDEAAAAVVKKL-GSELEAQDVVDYVRSRTDSKYKQLNG 505
               :..|.:            .|::..:.....:||.| |..|.::|:..:::.|..|  ..:..
Yeast   738 EPTLITFMVPRFDKPDDLSKFQSDVPKEVETDPIVKGLIGYHLLSKDIRTFLKKRLAS--YAMPS 800

  Fly   506 GAVIVDDLQRSANGKTNR 523
            ..|::|.|..:.|||.::
Yeast   801 LIVVMDKLPLNPNGKVDK 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 117/601 (19%)
AFD_class_I 47..522 CDD:302604 116/599 (19%)
LYS2NP_009673.1 alpha_am_amid 7..1379 CDD:274582 117/603 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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