DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and AT1G20490

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001322801.1 Gene:AT1G20490 / 838637 AraportID:AT1G20490 Length:447 Species:Arabidopsis thaliana


Alignment Length:403 Identity:102/403 - (25%)
Similarity:176/403 - (43%) Gaps:31/403 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPDLSIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYM-RSLGLLQSDIVGIIGR 89
            :|.|.:...|..:.:|  ..||.|.|:.|..||..:|.....|:|..: ..:|:.:.|:|.|:..
plant    35 NPSLDVTTFISSQPQR--GTTAFIDASTGHRLTFSDLWRVVDRVADCLYHEVGIRRGDVVLILSP 97

  Fly    90 NTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSA-----TAEL 149
            |:.::..|..:....|....:.|.......|.|....:.|:::|.......|:.:|     |.|.
plant    98 NSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLAPKLAAAISVVLTDEE 162

  Fly   150 DVKIVTMRNHPLDSIKIDEVVATPI--EENFQPAKLEKGNDQTLAILCSSGTTGTPKAVTITNSR 212
            |.|.|.:.:    .:::..:::..:  |.:.|..:.....|.|..:|.|||||||.|.| |::.|
plant   163 DEKRVELTS----GVRVVGILSEMMKKETSGQRVRDRVNQDDTAMMLYSSGTTGTSKGV-ISSHR 222

  Fly   213 HILAGNYHLTTADVQYSHNTLDWIT-------GLLTTITSGVFSTTRIIADNAFDPAFALRIIEE 270
            ::.|  |.....|.::..:.:...|       |||......|.|.:.::....|.....::.:|:
plant   223 NLTA--YVAKYIDDKWKRDEIFVCTVPMFHSFGLLAFAMGSVASGSTVVILRRFGLDDMMQAVEK 285

  Fly   271 YKVTWTIQPPSSMALMINCPD--FETCDMSSLRCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGF 333
            ||.|.....|..:..|||..|  ....|::|||....||:..:.||......:.....:...|..
plant   286 YKATILSLAPPVLVAMINGADQLKAKYDLTSLRKVRCGGAPLSKEVMDSFLEKYPTVNIFQGYAL 350

  Fly   334 TE---LGAMATINCHFDEKTGSVGQLVNGLKMKIIN-DDGESLGPDEIGEVCIMNNQHWSGYYGN 394
            ||   .|| :|.:.....|.|:||.|.:|::.:|:: |.|..:|.::.||:.:.......||:||
plant   351 TESHGSGA-STESVEESLKYGAVGLLSSGIEARIVDPDTGRVMGVNQPGELWLKGPSISKGYFGN 414

  Fly   395 EVETRNMRDSLGW 407
            |..|....:..||
plant   415 EEATNETINLEGW 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 102/403 (25%)
AFD_class_I 47..522 CDD:302604 97/382 (25%)
AT1G20490NP_001322801.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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