DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and AAE5

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_197141.1 Gene:AAE5 / 831498 AraportID:AT5G16370 Length:552 Species:Arabidopsis thaliana


Alignment Length:572 Identity:117/572 - (20%)
Similarity:210/572 - (36%) Gaps:185/572 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDT 119
            ||.|..|.....:|:||.:.|:|:.:||:|.::..||..|..:.:|...:|...:::|...|..|
plant    39 TVYTWRETNLRCLRVASSLSSIGIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDART 103

  Fly   120 IEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPLDSIKIDEVVATPIEENFQPAKLE 184
            :..:.:.....::|.|        ..:.:|.|:.::|       :..|..:...|.:     |.|
plant   104 VSVLLRHCGSKLLFVD--------VFSVDLAVEAISM-------MTTDPPILVFIAD-----KEE 148

  Fly   185 KGNDQTLA---------------------------------ILCSSGTTGTPKAVTITNSRHILA 216
            :|.|..:|                                 :..:||||..||.|.     |...
plant   149 EGGDADVADRTKFSYTYDDLIHRGDLDFKWIRPESEWDPVVLNYTSGTTSAPKGVV-----HCHR 208

  Fly   217 GNYHLTTADVQYSHNTLDWITGLLTTITSGVFS-TTRIIADNA-------------------FDP 261
            |.:      |....:.:||     |...:.|:. |..|...|.                   ||.
plant   209 GIF------VMSIDSLIDW-----TVPKNPVYLWTLPIFHANGWSYPWGIAAVGGTNVCLRKFDA 262

  Fly   262 AFALRIIEEYKVTWT-----------------------------IQPPSSMALMINCPDF----- 292
            ....|:|.::.||..                             ..||:::.|......|     
plant   263 PLIYRLIRDHGVTHMCGAPVVLNMLSATNEFQPLNRPVNILTAGAPPPAAVLLRAESIGFVISHG 327

  Fly   293 ----ETCDMSSLRC-------YMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINCHF 346
                ||..: ::.|       .:....||.|:.::|:|:          .||||:..:       
plant   328 YGLTETAGL-NVSCAWKPQWNRLPASDRARLKARQGVRT----------VGFTEIDVV------- 374

  Fly   347 DEKTGSVGQLVNGLKMKIINDDGESLGPDEIGEVCIMNNQHWSGYYGNEVETRNMRDSLGWYHSG 411
            |.::|           :.:..:||:     :||:.:..:....||..:.|.|.....: ||:::|
plant   375 DPESG-----------RSVERNGET-----VGEIVMRGSSIMLGYLKDPVGTEKALKN-GWFYTG 422

  Fly   412 DLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVV 476
            |:|.:..||:|.|.||.|:::..........::|:|:...|.|.||.|.......:|:...|.|.
plant   423 DVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVETVLYTNPAVNEVAVVARPDVFWGETPCAFVS 487

  Fly   477 KKLG-----SELEAQDVVDYVRSRTDSKY---KQLNGGAVIVDDLQRSANGK 520
            .|.|     :|:|   :::|.|.:. .||   |.::    .||:|.:::.||
plant   488 LKSGLTQRPTEVE---MIEYCRKKM-PKYMVPKTVS----FVDELPKTSTGK 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 117/572 (20%)
AFD_class_I 47..522 CDD:302604 117/572 (20%)
AAE5NP_197141.1 ttLC_FACS_AEE21_like 12..539 CDD:341283 117/572 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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