DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and AT4G19010

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_193636.1 Gene:AT4G19010 / 827639 AraportID:AT4G19010 Length:566 Species:Arabidopsis thaliana


Alignment Length:530 Identity:140/530 - (26%)
Similarity:238/530 - (44%) Gaps:54/530 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPDLSIGEIIFHEMRRHPQLTAQISATEGTVLTRGEL--LANAMRLASYMRSLGLLQSDIVGIIG 88
            ||:|.....:|  ..:|...||.|.:..|..::..||  :..:|....| ..||:.|.|:|.::.
plant    44 DPNLDAVSALF--SHKHHGDTALIDSLTGFSISHTELQIMVQSMAAGIY-HVLGVRQGDVVSLVL 105

  Fly    89 RNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKI 153
            .|:.:...:..:....|....::|.:.....|:|........:.|...:..||:.|    |.|.:
plant   106 PNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTSTENVEKLSS----LGVSV 166

  Fly   154 VTM-RNHPLDSIKIDEVVATPIEE---NFQPAKLEKGNDQTLAILCSSGTTGTPKAVTITNSRHI 214
            ::: .::..|||:|:......|.:   .|.|..|.| .|...||:.||||||..|.|.:|: |::
plant   167 ISVSESYDFDSIRIENPKFYSIMKESFGFVPKPLIK-QDDVAAIMYSSGTTGASKGVLLTH-RNL 229

  Fly   215 LA------------------GNYHLTTADVQYSHNTLDWITGLLTTITSGVFSTTRIIADNAFDP 261
            :|                  .|.:|....:.:.:....::.|||:     :.||  |:....||.
plant   230 IASMELFVRFEASQYEYPGSSNVYLAALPLCHIYGLSLFVMGLLS-----LGST--IVVMKRFDA 287

  Fly   262 AFALRIIEEYKVT-WTIQPPSSMALMINCPDFETCD--MSSLRCYMFGGSRAALEVQKGIRSRLS 323
            :..:.:||.:|:| :.:.||..|||......  .|.  ..||:....|.:..:.:..:.....|.
plant   288 SDVVNVIERFKITHFPVVPPMLMALTKKAKG--VCGEVFKSLKQVSSGAAPLSRKFIEDFLQTLP 350

  Fly   324 HDCLQFVYGFTELGAMAT--INCHFDEKTGSVGQLVNGLKMKIIN-DDGESLGPDEIGEVCIMNN 385
            |..|...||.||..|:.|  .|.....:..|||.|...::.|::: ..|..|.|...||:.|...
plant   351 HVDLIQGYGMTESTAVGTRGFNSEKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGP 415

  Fly   386 QHWSGYYGNEVETRN--MRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVI 448
            ....||..|...|:.  :.||  |..:||:.|.|.||:|:|:||.||::||:.....|.|:|:|:
plant   416 GVMKGYLNNPKATQMSIVEDS--WLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVL 478

  Fly   449 SEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDL 513
            ...|.:.:..|....:...|:...|.||::..:.|..:||:.||.|:. :.|:::. ..|:|:.:
plant   479 VSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQV-APYRKVR-KVVMVNSI 541

  Fly   514 QRSANGKTNR 523
            .:|..||..|
plant   542 PKSPTGKILR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 139/528 (26%)
AFD_class_I 47..522 CDD:302604 133/506 (26%)
AT4G19010NP_193636.1 PLN02574 9..566 CDD:215312 140/530 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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