DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and AT4G05160

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_192425.1 Gene:AT4G05160 / 825864 AraportID:AT4G05160 Length:544 Species:Arabidopsis thaliana


Alignment Length:528 Identity:140/528 - (26%)
Similarity:234/528 - (44%) Gaps:48/528 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPDLSIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRN 90
            ||:.|:...:|.....:|...|...:..|..||..:|.:...|||.....||:.::|:|.|...|
plant    24 DPNTSLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIFAPN 88

  Fly    91 TTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKIV- 154
            :........|....|..|.:.|..|..:.:.|..|.:.|.||......|:|::.    .|:.:| 
plant    89 SYQFPLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDKIKG----FDLPVVL 149

  Fly   155 -----TMRNHPLDSIKI---DEV--VATPIEENFQPAKLEKGNDQTLAILCSSGTTGTPKAVTIT 209
                 |:...|..:.||   |.|  ::.|:.|  .|....|.:| |.|:|.|||||||.|.|.:|
plant   150 LGSKDTVEIPPGSNSKILSFDNVMELSEPVSE--YPFVEIKQSD-TAALLYSSGTTGTSKGVELT 211

  Fly   210 NSRHI-----------LAGNYHLTTADVQYSHNTLDWITGLLTTITSGVFSTTRIIADNAFDPAF 263
            :...|           |.|.||    .|......:..:.||.....|.:.....:::...|:...
plant   212 HGNFIAASLMVTMDQDLMGEYH----GVFLCFLPMFHVFGLAVITYSQLQRGNALVSMARFELEL 272

  Fly   264 ALRIIEEYKVT--WTIQPPSSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSRLSHDC 326
            .|:.||:::||  |.: ||..:||. .....:..|:|||:....|.:....::.:.....:.:..
plant   273 VLKNIEKFRVTHLWVV-PPVFLALS-KQSIVKKFDLSSLKYIGSGAAPLGKDLMEECGRNIPNVL 335

  Fly   327 LQFVYGFTELGAMATINCHFDEK-----TGSVGQLVNGLKMKIIN-DDGESLGPDEIGEVCIMNN 385
            |...||.||...:.::.   |.:     :||.|.|..|::.:|:: :.|:|..|::.||:.:...
plant   336 LMQGYGMTETCGIVSVE---DPRLGKRNSGSAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGP 397

  Fly   386 QHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISE 450
            ....||..|...|:...|...|.|:|||||.:.||.||::||.||::||:.....|.::|.::..
plant   398 NMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVS 462

  Fly   451 MPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQR 515
            .|.:.:..|........|:...|.||:...|.:..||:..::..:. :.||:|. ....:..:.:
plant   463 HPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQV-APYKRLR-RVSFISLVPK 525

  Fly   516 SANGKTNR 523
            ||.||..|
plant   526 SAAGKILR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 139/526 (26%)
AFD_class_I 47..522 CDD:302604 134/504 (27%)
AT4G05160NP_192425.1 4CL 21..536 CDD:341230 140/528 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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