DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and 4CL5

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_188760.3 Gene:4CL5 / 821677 AraportID:AT3G21230 Length:570 Species:Arabidopsis thaliana


Alignment Length:517 Identity:129/517 - (24%)
Similarity:233/517 - (45%) Gaps:61/517 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTH----MLAVAYACFFNGI 106
            |..|....|.:||..::..|..|:|:.:..||:...|:|.::..|:..    .|||||.    |.
plant    63 TCIIDGATGRILTYADVQTNMRRIAAGIHRLGIRHGDVVMLLLPNSPEFALSFLAVAYL----GA 123

  Fly   107 AFHSLNITYDRDTIEKIYKVTRPSIIF---CDGDEFEKVRSATAELDVKIVTMRNHPLDSIKIDE 168
            ...:.|..|.:..|.|..|.:...:|.   |..|              |:..::|..:..:.:|:
plant   124 VSTTANPFYTQPEIAKQAKASAAKMIITKKCLVD--------------KLTNLKNDGVLIVCLDD 174

  Fly   169 -----VVA------------TPIEENFQPAKLEKGNDQTLAILCSSGTTGTPKAVTITNSRHILA 216
                 ||:            |..:|. :..|.:...:.|:|:..||||||.||.|.||:...:.:
plant   175 DGDNGVVSSSDDGCVSFTELTQADET-ELLKPKISPEDTVAMPYSSGTTGLPKGVMITHKGLVTS 238

  Fly   217 ---------GNYHLTTADVQYSHNTLDWITGLLTTITSGVFSTTRIIADNAFDPAFALRIIEEYK 272
                     .|.:.|..||......:..|..|...:.|.:.:...::....|:....:.:|:.||
plant   239 IAQKVDGENPNLNFTANDVILCFLPMFHIYALDALMLSAMRTGAALLIVPRFELNLVMELIQRYK 303

  Fly   273 VTWT-IQPPSSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTEL 336
            ||.. :.||..:| .|..|:.|..|:||:|..:.|.:....|::..:|.:..:......||.||.
plant   304 VTVVPVAPPVVLA-FIKSPETERYDLSSVRIMLSGAATLKKELEDAVRLKFPNAIFGQGYGMTES 367

  Fly   337 G----AMATINCHFDEKTGSVGQLVNGLKMKIIN-DDGESLGPDEIGEVCIMNNQHWSGYYGNEV 396
            |    ::|.....|..|:|:.|.::...:||::: :.|.||..::.||:|:..:|...||..:..
plant   368 GTVAKSLAFAKNPFKTKSGACGTVIRNAEMKVVDTETGISLPRNKSGEICVRGHQLMKGYLNDPE 432

  Fly   397 ETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFG 461
            .|....|..||.|:||:|::|.|..::|:||.||::|::.....|.::|:::...|.:.:..|..
plant   433 ATARTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVA 497

  Fly   462 IWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNR 523
            :...:..:...|.|.:..||:|...||..||..:. ..||::. ....::.:.::.:||..|
plant   498 MKDEVADEVPVAFVARSQGSQLTEDDVKSYVNKQV-VHYKRIK-MVFFIEVIPKAVSGKILR 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 128/515 (25%)
AFD_class_I 47..522 CDD:302604 127/513 (25%)
4CL5NP_188760.3 PLN02246 20..567 CDD:215137 129/517 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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