DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and Acsf2

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001030123.1 Gene:Acsf2 / 619561 RGDID:1562656 Length:615 Species:Rattus norvegicus


Alignment Length:560 Identity:145/560 - (25%)
Similarity:238/560 - (42%) Gaps:73/560 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHM 94
            ::||.:....:|.|...|.:...|...|...:|.....|.||.:.|:||.:.|.:|:.|.|:...
  Rat    73 TVGECLDATAQRFPNREALVIIHENIRLNFAQLKEEVDRAASGLLSIGLRKGDRLGMWGPNSYAW 137

  Fly    95 LAVAYACFFNGIAFHSLNITYDRDTIEKIY-KVTRPSIIF----------------CDGDEFEKV 142
            :.:..|....||...|:|..|....:|.:. ||....|:|                |  .|.||.
  Rat   138 VLIQLATAQAGIILVSVNPAYQASELEYVLRKVGCKGIVFPKQFKTQQYYNILKQVC--PELEKA 200

  Fly   143 RSATAEL----DVKIVTMRNHPL-DSIKIDEVVATPIEENFQPAKLEKGNDQTLAIL-------- 194
            :....:.    |:..|...:.|| .::.:|||||.            .|.:|.||.|        
  Rat   201 QPGALKSERLPDLTTVISVDAPLPGTLLLDEVVAA------------GGKEQNLAQLRYHQGFLS 253

  Fly   195 C--------SSGTTGTPKAVTITNSRHILAGNYHLTTADVQYSHNTLDWITGLLT---------- 241
            |        :|||||.||..|:  |.|.:..|.:|....::....|.:.:..:|.          
  Rat   254 CYDPINIQFTSGTTGNPKGATL--SHHNIVNNSNLIGQRLKMPAKTAEELRMVLPCPLYHCLGSV 316

  Fly   242 --TITSGVFSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYM 304
              |:.|.|...|.:::..:|:...||..|...|.|.....|:....::|.|||.:.|.:::|..:
  Rat   317 GGTMVSVVHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTTIRGGV 381

  Fly   305 FGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINCHFD---EKTGSVGQLVNGLKMKIIN 366
            ..||.|..|:.:.|.|:::...|..|||.||...:..:|...|   :|.||||:::...:.:|:|
  Rat   382 IAGSLAPPELIRAIISKMNMKELVVVYGTTENSPVTFMNFPEDTLEQKAGSVGRIMPHTEAQIVN 446

  Fly   367 -DDGESLGPDEIGEVCIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKE 430
             :.||....:..||:||.......||:|...:|........||.:||:..||..||..|:.|.|:
  Rat   447 METGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKD 511

  Fly   431 MLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSR 495
            |:.......||.::|....:.|||.|..|.|:..:..|:|..|.:..|.|.....:::..:.:.:
  Rat   512 MIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFCKGK 576

  Fly   496 TDSKYKQLNGGAVIVDDLQRSANGKTNRMANKAYF-LHLK 534
            . |.:| :....|.|:....:.:||..:...:... .|||
  Rat   577 I-SHFK-IPRYIVFVEGYPLTVSGKIQKFKLREQMEQHLK 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 142/546 (26%)
AFD_class_I 47..522 CDD:302604 138/528 (26%)
Acsf2NP_001030123.1 PRK08315 57..615 CDD:236236 145/560 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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