DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and dip2cb

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_005171457.1 Gene:dip2cb / 569986 ZFINID:ZDB-GENE-070912-589 Length:1595 Species:Danio rerio


Alignment Length:616 Identity:138/616 - (22%)
Similarity:232/616 - (37%) Gaps:199/616 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GTVLTRGELLANAMRLASYMRSLGLLQ-SDIVGIIGRNTTHMLAVAYACFFNGI------AFHSL 111
            |:.||..:|...|.::|:.:...|.|: .|.|.::......::|..|.|.:.|.      ..|..
Zfish  1028 GSSLTCLQLHKRAEKIATLLYERGQLRDGDHVALVYPPGLDLIAAFYGCLYAGCIPITVRPPHPQ 1092

  Fly   112 NITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPLDSIKIDEVVATPIEE 176
            ||:....|::.|.:|:|...:.            |:::..|::..|:   .|:.:|..:..||.|
Zfish  1093 NISTTLPTVKMILEVSRSVCVM------------TSQMISKLLKSRD---ASVAVDFKLWPPILE 1142

  Fly   177 N-----------FQPAKLEKGNDQTLAIL-CSSGTTGTPKAVTITNSRHILAGNYHLTTADVQYS 229
            .           |:|.     :..:||.| .|..|||            :|||        |:.|
Zfish  1143 TDDLPKRRCPLMFKPC-----DPDSLAYLDFSVSTTG------------MLAG--------VKMS 1182

  Fly   230 HNT-----------------------LDWITGL------LTTITSGVFSTTRIIADNAFDPAFAL 265
            ||.                       ||...||      |.::.:|..|......|...:||..|
Zfish  1183 HNATSALCRSVKLQCELYPSREVAVCLDPYCGLGFVLWCLCSVYAGQQSVLISPMDLEVNPALWL 1247

  Fly   266 RIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLR----------------------------- 301
            :.:.::||..|.   .|.::|..|    |..:|||.                             
Zfish  1248 QAVSQFKVRDTF---CSYSVMELC----TRSLSSLTDTLKARGMDLTRVRSCVVVAEERPRVALT 1305

  Fly   302 ---CYMF---GGSRAALEVQKGIRSRLSHDCLQ------------------FVYGFTELGAMATI 342
               |.:|   |....|:....|.|..|: .|||                  .||  .::.|:...
Zfish  1306 QSFCKLFKDVGLHPRAVSTAFGCRVNLA-ICLQPHRLGKLAEQGTSGPDPTTVY--VDMRALRHD 1367

  Fly   343 NCHFDEKTGS--------VGQLVNGLKMKIINDDGES-LGPDEIGEVCIMNNQHWSGY---YGNE 395
            .....|: ||        .|:::.|:::.|.|.:.:. :|...:||:.:.:.|:.|||   :|.|
Zfish  1368 RVRLVER-GSPHSLPLMESGKILPGVRIIIANPETKGPIGDSHLGEIWVHSPQNASGYFTVFGEE 1431

  Fly   396 VETRNMR-DSLG-----------WYHSGDLGYM----------DRDGFLYIMDRKKEMLKYQNIM 438
                |:| |..|           |..:|.||::          :|...||::....|:::.:.:.
Zfish  1432 ----NVRSDHFGARLSFGDTQTVWARTGYLGFLRRTDLTDASGERHDALYVVGALDEVMELRGMK 1492

  Fly   439 YYPNDIE-SVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQ 502
            |:|.||| |:|.....:.|..|| .|:|:.     ..||:..|||.||.|:|..|.:....::..
Zfish  1493 YHPIDIETSIIRAHRNITECAVF-TWTNLL-----VVVVELEGSEQEALDLVPMVTNVVLEEHYL 1551

  Fly   503 LNGGAVIVDD--LQRSANGKTNRMANKAYFL 531
            :.|..|:||.  :..::.|:..||..:..||
Zfish  1552 IVGVVVVVDTGVIPINSRGEKQRMHLRDGFL 1582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 134/606 (22%)
AFD_class_I 47..522 CDD:302604 134/605 (22%)
dip2cbXP_005171457.1 DMAP_binding 6..114 CDD:283995
CaiC 349..940 CDD:223395
AFD_class_I 375..937 CDD:302604
AMP-binding 1005..1489 CDD:278902 107/515 (21%)
AFD_class_I 1022..1584 CDD:302604 138/616 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.