DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and dip2ca

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_009295792.1 Gene:dip2ca / 563890 ZFINID:ZDB-GENE-031118-39 Length:1618 Species:Danio rerio


Alignment Length:646 Identity:149/646 - (23%)
Similarity:248/646 - (38%) Gaps:178/646 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DNDQKIWSGEPVVKYFDPDLSIGEIIFHEMRRHP-QLTAQISATEGTV---LTRGELLANAMRLA 70
            ||||        .:.|   |.:.|::....:..| .:...:.::.|.|   ||..:|...|.::|
Zfish  1014 DNDQ--------ARKF---LFLSEVLQWRAQTTPDHVLFTLLSSRGAVLSSLTCLQLHKRAEKIA 1067

  Fly    71 SYMRSLGLLQ-SDIVGIIGRNTTHMLAVAYACFFNGIA------FHSLNITYDRDTIEKIYKVTR 128
            :.:...|.|| .|.|.::......::|..|.|.:.|..      .|..||.....|::.|.:|:|
Zfish  1068 TMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSR 1132

  Fly   129 PSIIFCDG--DEFEKVRSATAELDVKIVTMRNHP--LDSIKIDEVVATPIEENFQPAKLEKGNDQ 189
            .:.:....  .:..|.:.|:|.:||     |..|  ||:   |::......:.::|:     |..
Zfish  1133 SACVMTTQIISKLLKSKEASAAVDV-----RTWPPVLDT---DDLPKKKPPQLYKPS-----NPD 1184

  Fly   190 TLAIL-CSSGTTGTPKAVTITNSRHILAGNYHLTTADVQYSHNT--------------------- 232
            |||.| .|..|||            :|||        |:.||..                     
Zfish  1185 TLAYLDFSVSTTG------------MLAG--------VKMSHTATSAFCRSIKLQCELYPSREVA 1229

  Fly   233 --LDWITGL------LTTITSGVFSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMINC 289
              ||...||      |.::.||..|.....::...:||..|..:.:::|..|....|.|.|....
Zfish  1230 ICLDPYCGLGFVLWCLCSVYSGHQSILIPPSELEVNPALWLLAVSQFRVRDTFCSYSVMELCTKG 1294

  Fly   290 PDFET-------CDMSSLR-CYMFGGSRAALEVQKGIRSRLSHD--------------------C 326
            ...:|       .|:|.:| |.:....|..:.:.:.. |:|..|                    |
Zfish  1295 LGLQTESLKARGLDLSRVRTCVVVAEERPRIALTQSF-SKLFKDLGLHPRAVSTSFGCRVNLAIC 1358

  Fly   327 LQ------------------FVYGFTELGAMATINCHFDEKTGS--------VGQLVNGLKMKII 365
            ||                  .||  .::.|:........|: ||        .|:::.|:::.|.
Zfish  1359 LQPHRLGKLADQGTSGPDPTTVY--VDMRALRHDRVRLVER-GSPHSLPLMESGKILPGVRIIIA 1420

  Fly   366 NDDGES-LGPDEIGEVCIMNNQHWSGY---YGNEV---ETRNMRDSLG-----WYHSGDLGYM-- 416
            |.:.:. ||...:||:.:....:.|||   ||:|.   :..|.|.|.|     |..:|.||::  
Zfish  1421 NPETKGPLGDSHLGEIWVHCAHNGSGYFTVYGDEALQSDHFNSRLSFGDTQTVWARTGYLGFLRR 1485

  Fly   417 --------DRDGFLYIMDRKKEMLKYQNIMYYPNDIE-SVISEMPQVAEVCVFGIWSNIFGDEAA 472
                    :|...||::....|.::.:.:.|:|.||| |||.....:.|..||. |:|:.     
Zfish  1486 TELTDASGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRTHKSIMECAVFP-WTNLL----- 1544

  Fly   473 AAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVD--DLQRSANGKTNRMANKAYFL 531
            ..||:..|||.||.|:|..|.:....::..:.|..|:||  .:..::.|:..||..:..||
Zfish  1545 VVVVELEGSEQEALDLVPLVTNAVLEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRDGFL 1605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 140/620 (23%)
AFD_class_I 47..522 CDD:302604 137/597 (23%)
dip2caXP_009295792.1 DMAP_binding 6..118 CDD:283995
CaiC 369..960 CDD:223395
Dip2 393..957 CDD:213273
AMP-binding 1028..1512 CDD:278902 110/520 (21%)
AFD_class_I 1047..1607 CDD:302604 141/602 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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