DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and acsf3

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_021329817.1 Gene:acsf3 / 562292 ZFINID:ZDB-GENE-121026-3 Length:579 Species:Danio rerio


Alignment Length:524 Identity:108/524 - (20%)
Similarity:205/524 - (39%) Gaps:81/524 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFF-NGIAF----- 108
            |.|..::....::||..:..|...:| |.||...:..:..|........:|.:. .|||.     
Zfish    74 SHTYHSLYKNSKILAGHITKALTCQS-GDLQGKRISFLCANDASYTVAQWASWMCGGIAVPLYRK 137

  Fly   109 HSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPLDSIKIDEVVATP 173
            |.|:      .:|.:...::.|::.......:.:.....:|.:..:.:   |..|.:.::....|
Zfish   138 HPLS------ELEYVISDSQSSLLVAGQSFVDTLEPLAQKLGLPCLKL---PATSSQFEDTQTLP 193

  Fly   174 IEENFQPAKLEKGNDQTLAILCSSGTTGTPKAVTITNS--RHILAG-----NYH-----LTTADV 226
            .:      .:....::...::.:|||||.||.|..|:|  :.::.|     .:|     |.|..:
Zfish   194 ED------MISDWAERPAMLIYTSGTTGRPKGVLHTHSSLQAMVQGLVSEWAWHKDDVILHTLPL 252

  Fly   227 QYSHNTLD------WITGLLTTITSGVFSTTRIIAD---------NAF--DPAFALRIIEEYKVT 274
            .:.|..::      |:..  |.|....||..::...         |.|  .|....::||.|...
Zfish   253 HHVHGIVNKLMCPLWVGA--TCIMLPDFSAQKVWEQLICSKSPMVNVFMAVPTIYSKLIEYYDQH 315

  Fly   275 WTIQPPSSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAM 339
            :| ||.....:...|.:       .:|..:.|.:.....|.:.......|..|: .||.||:| |
Zfish   316 FT-QPQVQDFIRAVCKE-------RIRLMVSGSAALPQPVLERWAEITDHVLLE-RYGMTEIG-M 370

  Fly   340 ATINCHFDEKT-GSVGQLVNGLKMKIIND------DGESLGPD-------EIGEVCIMNNQHWSG 390
            |..|.:...:. |:||..:.|::::|:.:      :|.|.|..       :.||:.:..:..:..
Zfish   371 ALSNSYKGPRVPGAVGVPLPGVEVRIMMNSSIVIAEGTSKGTQVKAGLEGKEGELLVRGSSVFQK 435

  Fly   391 YYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKK-EMLKYQNIMYYPNDIESVISEMPQV 454
            |:....||........|:.:||.. :.|||..:||.|.. :::|.........|:|..:...|.:
Zfish   436 YWNKPQETEESFTEDRWFKTGDTA-LYRDGVYWIMGRTSVDIIKSGGYKISALDVERHLLAHPDI 499

  Fly   455 AEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANG 519
            .:|.|.|.....:|.:..|.|..:.|..:...|:..:.|....|  ..:..|.::|:|:.|:..|
Zfish   500 TDVAVIGAPDATWGQKVTAVVQMRKGKTMILSDLKAWAREHMAS--YSIPTGLILVEDMPRNQMG 562

  Fly   520 KTNR 523
            |.|:
Zfish   563 KVNK 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 107/522 (20%)
AFD_class_I 47..522 CDD:302604 107/521 (21%)
acsf3XP_021329817.1 MCS 64..566 CDD:213307 107/522 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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