DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and acsl3b

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001139404.1 Gene:acsl3b / 559656 ZFINID:ZDB-GENE-030131-492 Length:711 Species:Danio rerio


Alignment Length:481 Identity:108/481 - (22%)
Similarity:185/481 - (38%) Gaps:97/481 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 AMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPS 130
            |.|..|.:.:||......:.|........:..|.|||.......:|..|.....|......|..:
Zfish   135 AQRFGSGLAALGQKPLCNIAIFCETRAEWVIAAQACFMYNFPLVTLYSTLGGSAIAHGLNETEVT 199

  Fly   131 IIFCDGDEFE-KVRSATAE---------LDVKIVTMRNHPL-----DSIKIDEVVATPIEENFQP 180
            .|....|..: ::::...|         :|.|..:..:.|.     :...:.|:.:.|  ||...
Zfish   200 HIVTSKDLLQSRLKAILLEVPRLKHIIVVDTKPTSWPDLPRGIMVHNMAAVQELGSKP--ENIMV 262

  Fly   181 AKLEKGNDQTLAILCSSGTTGTPKAVTITNSRHILAGNY-------HLTTADVQYSHNTLDWITG 238
            ::.:........|:.:||:||.||.|.|::| :|:||..       :|...|....:..|..:..
Zfish   263 SRRQPVPSDIAVIMYTSGSTGIPKGVMISHS-NIIAGITGMAERIPNLDENDTYIGYLPLAHVLE 326

  Fly   239 L---LTTITSGV---FSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPD------ 291
            |   |..::.|.   :|:.:.:||.      :.:|.:..|...::..|:.||.:....|      
Zfish   327 LSAELVCVSHGCRIGYSSPQTLADQ------SSKIKKGSKGDTSVLKPTLMAAVPEIMDRIYKNV 385

  Fly   292 -FETCDMSSLR--CYMFGGSRAALEVQKG-------------IRS--------------RLSHDC 326
             .:..:|||::  .::...:....::.||             :||              .||...
Zfish   386 MTKVEEMSSVQKTLFVLAYNYKMEQISKGYTTPLCDRLVFRKVRSLLGGNTRVLLSGGAPLSAAT 450

  Fly   327 LQFV-----------YGFTELGAMATINCHFDEKTGSVGQLVNGLKMKIINDDGESLG------P 374
            .:|:           ||.||.....||:...|..||.||..:  :..:|:..|.|..|      |
Zfish   451 QRFMNICFCCPVGQGYGLTETCGAGTISEMSDYSTGRVGAPL--VCSEIMLKDWEEGGYFSTDKP 513

  Fly   375 DEIGEVCIMNNQHWSGYYGNEVETRN--MRDSLG--WYHSGDLGYMDRDGFLYIMDRKKEMLKYQ 435
            :..||:.|.......|||.||.:.|.  ..|..|  |:.:||:|....||.|.|:||||:::|.|
Zfish   514 NPRGEILIGGPNVTMGYYKNEQKNREDFFEDKNGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQ 578

  Fly   436 NIMYYP-NDIESVISEMPQVAEVCVF 460
            ...|.. ..:|:|:...|.:..:|.:
Zfish   579 AGEYVSLGKVEAVLKNCPLIDNICAY 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 108/481 (22%)
AFD_class_I 47..522 CDD:302604 108/481 (22%)
acsl3bNP_001139404.1 PLN02387 43..708 CDD:215217 108/481 (22%)
LC-FACS_euk 121..708 CDD:213293 108/481 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583093
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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