DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and slc27a1b

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001070716.1 Gene:slc27a1b / 553512 ZFINID:ZDB-GENE-061013-672 Length:648 Species:Danio rerio


Alignment Length:520 Identity:119/520 - (22%)
Similarity:198/520 - (38%) Gaps:117/520 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHM 94
            :|..:....:..||:..|.:..:.|.|.:..||...:..:|.::.:.|....|:|.|...:...|
Zfish    79 TIPSLFAQRVALHPEKAALVDESSGEVWSFSELDRRSNAVAQWVLAQGWRSGDVVAIFMESRPQM 143

  Fly    95 LAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSAT-----AELDVKIV 154
            :|:.......|:....:|....||           |:|.|.|     |..|.     ||| :.:|
Zfish   144 VALWLGMAKVGVEPALINFNLRRD-----------SLIHCMG-----VSGACGMVFGAEL-LDVV 191

  Fly   155 TMRNHPLDSIKIDEVVATPIE--ENFQPAKLE----------------KGNDQTLAILCSSGTTG 201
            ......|.|:.:....:.|.|  ::...|.|:                ||.:..|..:.:|||||
Zfish   192 LEVRESLRSLSLFSCGSAPAEMLDSLSAADLDALLSKSPETPPAVAHNKGFNDRLFYIYTSGTTG 256

  Fly   202 TPKAVTITNSRH--ILAGNYH---LTTADVQYS----HNTLDWITGL-------LTTITSGVFST 250
            .|||..:.:||:  |.|.:|:   |...||.|.    :::...|.|:       ||.:....||.
Zfish   257 LPKAAIVVHSRYYRIAAFSYYSFGLQPDDVVYCCLPLYHSAGNIIGVGQCLLHGLTVVIRRKFSA 321

  Fly   251 TRIIADNAFDPAFALRIIEE---YKVTWTIQPPSSMALMINCPDFETCDMSSLRCYMFGGSRAAL 312
            :|...|........::.|.|   |.::..::|..|              :..:|..|..|.|.  
Zfish   322 SRFWDDCVKYNCTVVQYIGEICRYLLSQPVRPSES--------------LHRVRVAMGNGLRP-- 370

  Fly   313 EVQKGIRSRLSHDCLQFVYGFTELGAMATINC---HFDEKTGSVGQLVNGL-------------- 360
            .|.:....|.|...:...||.||      .||   :.|.|.|:.|  .|.:              
Zfish   371 NVWESFMKRFSVKRIGEFYGATE------CNCSLANMDNKVGACG--FNSVVLPSVYPIRLLRAD 427

  Fly   361 --KMKIINDDGESLGPDEIGEVCI----MNNQ----HWSGYYGNEVETRNM-----RDSLGWYHS 410
              .|::|.|......|.:.||..|    :|.|    .:.||...|..::.:     |.....|.|
Zfish   428 EDTMELIRDSRGLCVPCKPGEPGIIVGRINPQDPLRRFDGYANEEATSKKISHNVFRKGDSAYVS 492

  Fly   411 GDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAV 475
            |||..||..|::|..||..:..:::.......::|.|:|.:.:..:|.|:|:  ::.|.|..|.:
Zfish   493 GDLMVMDELGYVYFRDRGGDTFRWRGENVSTTEVEGVLSALLKQTDVAVYGV--SVPGVEGKAGM 555

  Fly   476  475
            Zfish   556  555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 119/520 (23%)
AFD_class_I 47..522 CDD:302604 116/503 (23%)
slc27a1bNP_001070716.1 PRK08279 60..648 CDD:236217 119/520 (23%)
AFD_class_I 103..613 CDD:302604 115/496 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582999
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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