DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and Acsl4

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_997508.1 Gene:Acsl4 / 50790 MGIID:1354713 Length:711 Species:Mus musculus


Alignment Length:607 Identity:126/607 - (20%)
Similarity:225/607 - (37%) Gaps:172/607 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTI----- 120
            |:........|.:.:|||...:.:.|........:..|..||.......:|..|..|:.:     
Mouse   130 EVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGREAVVHGLN 194

  Fly   121 --EKIYKVTRPSIIFCDGDEFEKVRSATAEL---------DVKIVTMRNHP----LDSIK-IDEV 169
              |..|.:|...::      ..|:::|..::         |.|.:....:|    :.|:: ::|:
Mouse   195 ESEASYLITSVELL------ESKLKAALVDINCVKHIIYVDNKTINRAEYPEGLEIHSMQSVEEL 253

  Fly   170 VATPIEENFQ-PAKLEKGNDQTLAILCSSGTTGTPKAVTITNSRHILAG---------------N 218
            .|.|  ||.. |......:|..: ::.:||:||.||.|.:.:| :::||               .
Mouse   254 GAKP--ENLSVPPSRPTPSDMAI-VMYTSGSTGRPKGVMMHHS-NLIAGMTGQCERIPGLGPKDT 314

  Fly   219 Y--HLTTADVQYSHNTLDWITGLLTTITSGV---FSTTRIIADNAFDPAFALRIIEEYKVTWTIQ 278
            |  :|..|.|      |: :|..::..|.|.   :|:...::|.      :.:|.:..|...|:.
Mouse   315 YIGYLPLAHV------LE-LTAEISCFTYGCRIGYSSPLTLSDQ------SSKIKKGSKGDCTVL 366

  Fly   279 PPSSMALMINCPD-------FETCDMSSLRCYMF--GGSRAALEVQKG----------------- 317
            .|:.||.:....|       .:..:|:.::..:|  |......:::||                 
Mouse   367 KPTLMAAVPEIMDRIYKNVMSKVQEMNYVQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKAL 431

  Fly   318 ----IRSRLS---------HDCLQFV--------YGFTELGAMATINCHFDEKTGSVGQ--LVNG 359
                :|..||         |..:...        ||.||.....|:....|..||.||.  :...
Mouse   432 LGGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCE 496

  Fly   360 LKMKIINDDGESL--GPDEIGEVCIMNNQHWSGYYGNEVETRN--MRDSLG--WYHSGDLGYMDR 418
            :|:|...:.|.::  .|:..||:.|.......||:.||.:|..  ..|..|  |:.:||:|....
Mouse   497 IKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYCVDENGQRWFCTGDIGEFHP 561

  Fly   419 DGFLYIMDRKKEMLKYQNIMYYP-NDIESVISEMPQVAEVCVF---------------------- 460
            ||.|.|:||||:::|.|...|.. ..:|:.:...|.:..:|.|                      
Mouse   562 DGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLL 626

  Fly   461 -------GIWSNIFGDEA-AAAVVKKL-----GSELEAQDVVDYVRSR-----------TDS--- 498
                   |.|.:|..:.| .|.::|::     ..:||..::...||..           ||:   
Mouse   627 AQQKGVEGSWVDICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKL 691

  Fly   499 KYKQLNGGAVIVDDLQRSANGK 520
            |.|:|...  .:.|::|...||
Mouse   692 KRKELKNH--YLKDIERMYGGK 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 126/607 (21%)
AFD_class_I 47..522 CDD:302604 126/607 (21%)
Acsl4NP_997508.1 LC_FACS_euk1 121..696 CDD:341294 121/588 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839033
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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