DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and acsl1b

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001003569.1 Gene:acsl1b / 445175 ZFINID:ZDB-GENE-040801-88 Length:697 Species:Danio rerio


Alignment Length:613 Identity:133/613 - (21%)
Similarity:207/613 - (33%) Gaps:183/613 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PENSYDNDQKIWSGEPVVKYFDPDLSIGEIIFH----EMRRHPQLTAQ--------ISATEGTVL 57
            |...:.....:.:|.|::.::..|.......||    |.:..|.|.::        :|.:|  |:
Zfish    65 PGGEFARRGAVLNGGPLLSFYYEDAKTMYECFHRGLRESKNGPCLGSRKPKQPYEWLSYSE--VI 127

  Fly    58 TRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEK 122
            .|.|.|.:|.....:.:|    ....:||..:|.........||:...:....|..|...:.|..
Zfish   128 ERAEHLGSAFLHKGHSKS----GDPYIGIFSQNRPEWTIAELACYTYSLISVPLYDTLGTEAISY 188

  Fly   123 IYKVTRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPLDSI----KID------------EVVA 171
            |...|..|.:.||..|       .|.|.::.|:.|.|.:.::    .:|            ::::
Zfish   189 ILDKTCISTVVCDVPE-------KAGLLLECVSGRQHSVKTLILMADVDADLQSRAQQCGIQIIS 246

  Fly   172 TPIEENF------QPAKLEKGNDQTLAILC-SSGTTGTPKAVTITNSR---------HILAGNYH 220
            ....||.      ||   |......||::| :|||||.||...:|:..         |:......
Zfish   247 LTDAENMGKTHRRQP---EPPQPDDLAVICFTSGTTGNPKGAMLTHRNIVSNISAFIHVTNSTCP 308

  Fly   221 LTTADVQYSHNTLDWITGLLTTITSGVF-----------STTRIIADN--AFDPAFALRIIEEYK 272
            |::.|   ||.:...:..:...:..||.           ...|::.|:  |..|           
Zfish   309 LSSRD---SHISYLPLAHMFERVVQGVVLLHGARIGYFQGDIRVLMDDLIALKP----------- 359

  Fly   273 VTWTIQP--PSSMALMI-------NCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSR------- 321
               ||.|  |..:..|.       |.|       ...|...|...|...|::.||..|       
Zfish   360 ---TIFPVVPRLLNRMFDKIYGQANTP-------LKRRLLEFAFRRKEAEMKSGIMRRDSIWDKI 414

  Fly   322 ----------------------LSHDCLQFV-----------YGFTELGAMATINCHFDEKTGSV 353
                                  :|...|.|:           ||.||..|.:|.....|...|.|
Zfish   415 IFKKVQASVGGCVRMMVTGAAPISEPVLTFLRAALGCQFYEGYGQTECTAGSTTTLPGDWTAGHV 479

  Fly   354 G--------QLVNGLKMKIINDDGESLGPDEIGEVCIMNNQHWSGYYGNEVETRNMRDSLGWYHS 410
            |        :||:..:|.....:||       ||||:.....:.||..:..:|:...|..||.|:
Zfish   480 GAPLPCNDIKLVDVAEMNYYAANGE-------GEVCVRGPNAFKGYLKDPEKTKEALDEEGWVHT 537

  Fly   411 GDLGYMDRDGFLYIMDRKKEMLKYQNIMYY-PNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAA 474
            ||:|....:|.|.|:||||.:.|.....|. |..||::......|.:..|       .||...|.
Zfish   538 GDIGRWLPNGSLKIVDRKKHIFKLAQGEYIAPEKIENIYIRSEAVVQAFV-------HGDSLQAC 595

  Fly   475 VV--------------KKLGSELEAQDV 488
            :|              ||.|.|...:|:
Zfish   596 LVAIIVPDPDFLPGWAKKRGIEGTYEDL 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 130/592 (22%)
AFD_class_I 47..522 CDD:302604 124/567 (22%)
acsl1bNP_001003569.1 PLN02736 88..695 CDD:178337 130/590 (22%)
LC-FACS_euk 116..692 CDD:213293 124/562 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583134
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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