DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and CG3961

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:489 Identity:105/489 - (21%)
Similarity:173/489 - (35%) Gaps:117/489 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYK 125
            |.|..|....:.|.:||.....::||..:|....:.....|:...:....|..|...|....|.:
  Fly   138 EALLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIR 202

  Fly   126 VTRPSIIFCDGD------------------EFEKVRSATAE------------LDV-KIVTMRNH 159
            .|...::..:.|                  ..:.:|..|.|            :|| |:....||
  Fly   203 QTDMQVVIVEDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNH 267

  Fly   160 PLDSIKIDEVVATPIEENFQPAKLEKGNDQTLAILC-SSGTTGTPKAVTITNSRHILA------- 216
            |       ||..|.               :.|..:| :|||||.||.|.:|:...:..       
  Fly   268 P-------EVPPTA---------------EDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQ 310

  Fly   217 -GNYHLTTADVQYS------------HNTLDWITGL--------------LTTITSGVFSTTRII 254
             |::.:...||..|            .|.:.::.|.              |..:...|......:
  Fly   311 MGDHRIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPAVPRL 375

  Fly   255 ADNAFDPAFALRIIEEYKVTWTIQPPSSMALMI-------------NCPD---FETCDMS---SL 300
            .:..:|     :|..:...:...:...:||:..             .|.|   |:....:   :|
  Fly   376 LNRVYD-----KIQNDISASGLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNL 435

  Fly   301 RCYMFGGSRAALEVQKGIRSRLSHDCLQFV-YGFTELGAMATINCHFDEKTGSVGQLVNGLKMKI 364
            |..:.|.:..|..|...:|..|.  ||... ||.||.....|:....|.....||..|:...:|:
  Fly   436 RLMVVGSAPLAGNVLTFMRCALG--CLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKL 498

  Fly   365 IN-DDGESLGPDEIGEVCIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRK 428
            :: .:.|.......||||:..:..:.|||.:..:|....||.||:|:||:|....:|.|.|:||:
  Fly   499 VDVPEMEYFANQNTGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRR 563

  Fly   429 KEMLKYQNIMY-YPNDIESVISEMPQVAEVCVFG 461
            |.:.|.....| .|..||::.:....|.:|.|:|
  Fly   564 KHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYG 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 105/489 (21%)
AFD_class_I 47..522 CDD:302604 105/489 (21%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 105/489 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452247
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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