DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and acsl4a

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_956943.1 Gene:acsl4a / 393622 ZFINID:ZDB-GENE-040426-1565 Length:706 Species:Danio rerio


Alignment Length:556 Identity:120/556 - (21%)
Similarity:204/556 - (36%) Gaps:158/556 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SYDNDQKIWSGEPVVKYFDPDLSIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASY 72
            |.||:.     :|..|.| ..|.:||   ::.:.:.:|..::|                 ...|.
Zfish    99 SGDNET-----QPNGKVF-KKLILGE---YKWKSYEELDIEVS-----------------HFGSG 137

  Fly    73 MRSLGLLQSDIVGIIGRNTTHMLAVAYACF---FNGIAFHS----------LN---ITYDRDTIE 121
            :.:||......:.|........:..|.|||   |..:.|::          ||   :|:...:||
Zfish   138 LAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTFYATLGEDAVAYGLNESGVTHLVTSIE 202

  Fly   122 ----KIYKV-----TRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPLDSIKIDEVVATPIEEN 177
                |:..|     ....||:.|.   :.:.:|.....::|.:|.:       ::|:.|.|  ||
Zfish   203 LLETKLKSVLLQIPNLKHIIYVDS---KSMNTAGFPQGIQIHSMHS-------VEELGAKP--EN 255

  Fly   178 FQPAKLEKGNDQTLAILCSSGTTGTPKAVTITNSRHI--LAGNYH----LTTADVQYSHNTLDWI 236
            .....::........|:.:||:||.||.|.|.:|..|  :||...    |...|...::..|..:
Zfish   256 LNRPIVKPVPSDLAVIMYTSGSTGRPKGVMIIHSNLIGGMAGQCERIPGLGPKDTYIAYLPLAHV 320

  Fly   237 ---TGLLTTITSGV---FSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALM--------- 286
               |..::.:|.|.   :|:.:.::|.      :.:|.:..|...::..||.||.:         
Zfish   321 LEMTAEISCVTYGCRIGYSSPQTLSDQ------STKIKKGSKGDCSVLKPSLMAAVPEIMDRINK 379

  Fly   287 --------INCP--------------------DFETCDM----------SSLRCYMFGGSRAALE 313
                    ::|.                    |...|::          .::|..:.||:..:..
Zfish   380 NVMSKVQEMSCVQRTLFKPAYDYKLEQIKKGYDAPLCNILFKKVRALLGGNVRMMLSGGAPLSPA 444

  Fly   314 VQKGIRSRLSHDCLQFV------YGFTELGAMATINCHFDEKTGSVGQ--LVNGLKMKIINDDGE 370
            .|     |..:.|  |.      ||.||.....||....|..||.||.  :...:|:|...:.|.
Zfish   445 TQ-----RFMNIC--FCCPVGQGYGLTETCGAGTITEVADYSTGRVGAPLICCEVKLKDWAEGGY 502

  Fly   371 SL--GPDEIGEVCIMNNQHWSGYYGNE--------VETRNMRDSLGWYHSGDLGYMDRDGFLYIM 425
            :.  .|...||:.|.......|||..|        |:....|    |:.:||:|.|..||.|.|:
Zfish   503 TKRDKPHPRGEILIGGPNVTMGYYRTEGCNNDDFFVDQNGQR----WFCTGDIGEMHADGCLQIV 563

  Fly   426 DRKKEMLKYQNIMYYP-NDIESVISEMPQVAEVCVF 460
            ||||:::|.|...|.. ..:||.:.....|..:|.:
Zfish   564 DRKKDLVKLQAGEYVSLGKVESALKNCSFVDNICAY 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 114/538 (21%)
AFD_class_I 47..522 CDD:302604 110/517 (21%)
acsl4aNP_956943.1 PLN02387 60..703 CDD:215217 120/556 (22%)
LC-FACS_euk 117..703 CDD:213293 113/532 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582947
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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