DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and dip-2

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001293298.1 Gene:dip-2 / 3565539 WormBaseID:WBGene00017885 Length:1681 Species:Caenorhabditis elegans


Alignment Length:615 Identity:131/615 - (21%)
Similarity:217/615 - (35%) Gaps:173/615 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SATEGTVLTRGELLANAMRLASYMRSLGLLQ-------------SDIVGIIGRNT--THMLAVAY 99
            ||...|.||.|:|.:.|.::| ||.....:|             .|.|.:|..||  .|.||..|
 Worm   434 SAKPSTQLTYGKLHSRAGKVA-YMLLTKTVQVNKDGSKNVMCKPGDRVALIYPNTQPLHFLAAFY 497

  Fly   100 ACFFNGIAFHSLNITYDRD--------------------TIEKIY----KVTRPSIIFCDGDEFE 140
            .|...|:....:.:...:.                    |.|..|    |....|..|.......
 Worm   498 GCLQAGVIPVPVEMPSSKREAGIAQLGFLLGNCGVKVALTSESCYKGLPKKVNTSSTFSAPSGSN 562

  Fly   141 KVRSATAELDVKIVTMRNHPLDSIKIDEVVATPIEENFQPAKLEKGNDQTLA-ILCSSGTTGTPK 204
            .:...::|    ||..|..|.....:.|.::.|..:...|.:|.   |:|:| |..::|..||.|
 Worm   563 SLTGTSSE----IVDFRGWPRLWWAVTEHMSKPSRDWTAPPRLA---DETIAYIEYTTGNDGTVK 620

  Fly   205 AVTITNSRHILAGNYHLTTADVQYSHN-----TLDW--ITGLLTTITSGVFSTTRII----ADNA 258
            ...:|. :.:.|....|||| ::|..:     .:|:  ..||...|.:.:|:..::|    :...
 Worm   621 GCCVTR-QAVFAHCRALTTA-MEYKEDETMVCVVDFKREVGLWHAILASIFNGMKVIFVPYSLMK 683

  Fly   259 FDPAFALRIIEEYKVTWTIQPPSSM--ALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSR 321
            .:||..:.::.:|:.|..:.....:  ||:.. .|.:...::|||         .|.|..|....
 Worm   684 MNPATWMHMVSKYQATTALVKSRDLHWALLAT-RDHKDISLASLR---------TLLVADGANPW 738

  Fly   322 LSHDCLQFVYGFT----ELGAMATINCHFDEKTGSV----------------------------- 353
            ....|..|...||    .|...|...|....:||::                             
 Worm   739 SLSSCDAFAAAFTPSPYSLRPDAMCPCAGSSETGTISIRRRGNAQLGSQSGRGILSMSALSHCVV 803

  Fly   354 ----------------GQLVNGLKMKIINDDGES--LGPDEIGEVCIMNNQ----HWS------- 389
                            ||:|.|..:.:...||.:  ...|||||:|:..|.    :|:       
 Worm   804 RVDTENSLTSLTLQDAGQIVAGAVVVVTAIDGSNRLCQADEIGEICVSANSTAQLYWALDGQTHH 868

  Fly   390 -------GYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPND-IES 446
                   |.||..:      .::.:..||.:|:|..||.::::.|::.:|......:..:| |.:
 Worm   869 TFKVEPVGEYGKLI------GAVRYVRSGLIGFMGPDGMVFVVARRQSLLAVSGRYHSADDIIAT 927

  Fly   447 VISEMPQV----AEVCVFGIWSNIFGDEAAAAVV--KKLGSELEAQDVVDYVRSRTDSKY----- 500
            |::..|..    ..:|||.  :::..||....|.  |...||.||.|.:..|....|:.:     
 Worm   928 VLAVEPMKFVYRGRICVFS--TSVLRDERIVIVAEQKPNCSEEEAFDWITRVLRAIDTIHQVGIY 990

  Fly   501 -----------KQLNGGAVIVDDLQRSANG 519
                       |...||..:.:..||..||
 Worm   991 CCALVPANHLPKTPLGGVHVSETKQRFENG 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 131/615 (21%)
AFD_class_I 47..522 CDD:302604 131/615 (21%)
dip-2NP_001293298.1 DMAP_binding 4..114 CDD:368923
Dip2 427..1027 CDD:341231 131/615 (21%)
Dip2 1096..1677 CDD:341231
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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