DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and acsl4b

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001093209.1 Gene:acsl4b / 334561 ZFINID:ZDB-GENE-030131-6493 Length:671 Species:Danio rerio


Alignment Length:612 Identity:134/612 - (21%)
Similarity:222/612 - (36%) Gaps:166/612 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VKYFD--PDLSIGEIIFHEMRRHPQLTAQISATEGTV---LTRG-------ELLANAMR-LASYM 73
            ||.|:  |.|...|::..|..:.|         .|.:   |..|       |.:..|:. ..|.:
Zfish    47 VKSFNQAPCLGTREVLSEEEEKQP---------NGKIFKKLVLGNYSWMSYEAVDQAVESFGSGL 102

  Fly    74 RSLGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIE-------KIYKVTRPSI 131
            .:||......:.|........:..|.|||.......:|..|...|.:.       ..:.:|...:
Zfish   103 AALGQKPRQTIAIFCETRAEWMIAAQACFRRNYPLVTLYATLGEDAVAYGLNQCGATHLITSTEL 167

  Fly   132 IFCDGDEFEKVRSATAELDVKI------VTMRNHPLDSI-----KIDEVVATPIEENFQPAKLEK 185
            :   ..:.:.|..|.:.|...|      |...::|...|     ::.|:.|.|  ||.. .:.|:
Zfish   168 L---QSKLKNVLFAVSGLQHVIYVGSGEVHQADYPQSLIIHSMQEVTELGAKP--ENLS-VEYER 226

  Fly   186 GNDQTLA-ILCSSGTTGTPKAVTITNSRHI--LAGNYH----LTTADVQYSHNTLDWI---TGLL 240
            .:...|| ::.:||:||.||.|.:.:|..|  :||...    |.:.|...|:..|..:   |..:
Zfish   227 PSASDLAVVMYTSGSTGNPKGVKMQHSNLIAGMAGQCQRIPGLGSQDTIVSYLPLAHVLELTAEI 291

  Fly   241 TTITSGV---FSTTRIIADN--------------------AFDPAFALRI-------IEEYKV-- 273
            :.::.|.   :|:...:.|.                    |..|....||       ::|..|  
Zfish   292 SCLSHGCRLGYSSPHTLTDQSSKIKKGSKGDCSVLKPTLIAAVPEIMDRICKNVNGKLQEMSVIK 356

  Fly   274 --------TWTIQPPSSMALMINCPDFETCDM-----------SSLRCYMFGGSRAALEVQKGIR 319
                    .:.:|..|..|      |...|||           ..:|..:.||:..:...|    
Zfish   357 RTLFKLGFDYKLQQVSKGA------DSPMCDMLFFKQVNVLLGGCVRRMLSGGAPLSASTQ---- 411

  Fly   320 SRLSHDC---LQFVYGFTELGAMATINCHFDEKTGSVGQ--LVNGLKMKIINDDGESL--GPDEI 377
             |..:.|   :...||.||.....||:...|..||.||.  :.:.:|::...:.|.:.  .|...
Zfish   412 -RFMNVCFCPIAVGYGLTETCGAGTISDSSDYSTGRVGAPLICSEIKLRDWPEGGYTSQDKPHPR 475

  Fly   378 GEVCIMNNQHWSGYYGNEVETRNMR---DSLG--WYHSGDLGYMDRDGFLYIMDRKKEMLKYQNI 437
            ||:.|.......||||:|.|.:|..   |..|  |:.:||:|.:..||.|.|:||||:::|.|..
Zfish   476 GEILIGGPNVAMGYYGSEGEGQNDNFWVDEAGQRWFSTGDIGEVHPDGCLEIVDRKKDLVKLQAG 540

  Fly   438 MYYP-NDIESVISEMPQVAEVCVF-----------------------------GIWSNIFG---- 468
            .|.. ..:|:.:...|.:..:||:                             |.|.:|..    
Zfish   541 EYVSLGKVEAAMKNSPLIDNICVYASSDQNYVISFVVPNQKNLTELAKKSGIDGEWDDICNHTMM 605

  Fly   469 DEAAAAVVKKLG--SELEAQDVVDYVR 493
            :|....|:|::.  |:||..:|...:|
Zfish   606 EEEVLKVIKEIAVTSKLERFEVPQKIR 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 131/608 (22%)
AFD_class_I 47..522 CDD:302604 126/585 (22%)
acsl4bNP_001093209.1 PLN02387 26..668 CDD:215217 134/612 (22%)
LC-FACS_euk 81..668 CDD:213293 124/569 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582935
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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