DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and Slc27a3

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001099909.1 Gene:Slc27a3 / 295219 RGDID:1310605 Length:667 Species:Rattus norvegicus


Alignment Length:434 Identity:92/434 - (21%)
Similarity:153/434 - (35%) Gaps:124/434 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 ATPIEENFQPAKLEKGND--QTLAILCSSGTTGTPKAVTITNSRHI-LAGNYHLT---TADVQYS 229
            ||.::|.. |..|....:  .|...:.:|||||.|||..:::.:.: ..|.|.|.   ..||.|.
  Rat   246 ATQVDEPV-PGYLSAPQNIMDTCLYIFTSGTTGLPKAARVSHLKVLQCQGFYQLCGVHQEDVIYL 309

  Fly   230 HNTLDWITGLL-----------TTITSGVFSTTRIIADNAFDPAFALRIIEE---YKVTWTIQPP 280
            ...|..::|.|           |.:....||.::...|.........:.|.|   |.|.   |||
  Rat   310 ALPLYHMSGSLLGIVGCLGIGATVVLKPKFSASQFWEDCQRHGVTVFQYIGELCRYLVN---QPP 371

  Fly   281 SSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIR--------SRLSHDCLQFVYGFTELG 337
                             |...|    |.:..|.|..|:|        .|.....:...||.|| |
  Rat   372 -----------------SKAEC----GHKVRLAVGSGLRPDTWDRFVRRFGPLQILETYGATE-G 414

  Fly   338 AMATINCHFDEKTGSVGQ-----------------LVNGLKMKIINDDGESL--GPDEIGEVC-- 381
            .:||.|  :..:.|:||:                 ::.|..::  |..|..:  .|.|.|.:.  
  Rat   415 NVATFN--YTGQQGAVGRASWLYKHIFPFSLIRYDVMTGEPIR--NAQGHCMAASPGEPGLLVAP 475

  Fly   382 IMNNQHWSGYYG--NEVETRNMRDSLG----WYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYY 440
            :.....:.||.|  ...:.:.::|...    ::::|||...|..|||:..||..:..:::.....
  Rat   476 VSQESPFLGYAGAPELAQEKLLKDVFRPGDIFFNTGDLLVCDEQGFLHFHDRTGDTFRWKGENVA 540

  Fly   441 PNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVD-----------YVRS 494
            ..::..|:..:..:.||.::|:  .:.|.|..|.:........:|.|:|.           |.|.
  Rat   541 TTEVAEVLEALDFLQEVNIYGV--TVPGHEGRAGMAALALRPPQALDLVQLYTHVSENLPPYARP 603

  Fly   495 R---------TDSKYKQLNGGAVIVDDLQRSANGKTNRMANKAY 529
            |         |...:||                 :..||||:.:
  Rat   604 RFLRLQESLATTETFKQ-----------------QKVRMANEGF 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 88/426 (21%)
AFD_class_I 47..522 CDD:302604 88/425 (21%)
Slc27a3NP_001099909.1 PRK08279 60..666 CDD:236217 92/434 (21%)
AFD_class_I 91..657 CDD:302604 92/434 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342914
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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