DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and Acsm5

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_006507967.1 Gene:Acsm5 / 272428 MGIID:2444086 Length:591 Species:Mus musculus


Alignment Length:572 Identity:114/572 - (19%)
Similarity:220/572 - (38%) Gaps:116/572 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EPVVKYFDPDLSIGEIIFHEMRRHPQLTAQISAT--------------EGTVL--TRGELLANAM 67
            :||.:||:        ..|::.   .:.:|:..|              .||.:  |..||...:.
Mouse    59 QPVPEYFN--------FAHDVL---DVWSQLEKTGHRPPNPAFWWVNGSGTEVKWTFEELGKQSR 112

  Fly    68 RLASYMRSL-GLLQSDIVGIIGRNTTHMLAVAYACFFNGIA-FHSLNITYDRDTIEKIYKVTRPS 130
            :.|:.:..: ||...|.:.::.........::.||...|:. ...::....:|...::......|
Mouse   113 KAANVLEGVCGLQPGDRMMLVLPRLPDWWLISVACMRTGVVMIPGVSQLTAKDLKYRLQAARAKS 177

  Fly   131 IIFCD--GDEFEKVRSATAELDVKIVTMRNHPLDSIKIDEVV--ATPIEENFQPAKLEKGNDQTL 191
            |:..|  ..:.:.:.:....|..|::.........|...|::  |:| |.|.  .:...|:  ::
Mouse   178 IVTSDALAPQVDAISADCPSLQTKLLVSDTSRPGWINFRELLRAASP-EHNC--VRTRSGD--SV 237

  Fly   192 AILCSSGTTGTPKAVTITNSRH----ILAGN--YHLTTADVQYSHNTLDWITGLLTTITSG---- 246
            ||..:|||||.||.|..:.|.:    :.:|.  ..||.:|:.::.....|:....|..::.    
Mouse   238 AIYFTSGTTGAPKMVEHSQSSYGLGFVASGRRWMALTESDIFWNTTDTGWVKAAWTLFSAWSNGA 302

  Fly   247 ---VFSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYMFGG- 307
               |....|:      |....|..:..:.:|.....|:...|::. .|........||..:.|| 
Mouse   303 CIFVHELPRV------DAKTILNTLCRFPITTLCCVPTLFRLLVQ-EDLTRYKFQCLRHCLTGGE 360

  Fly   308 -----------SRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINCHFDEKTGSVGQLVNGLK 361
                       |:..||:.:|             ||.:|...:...:.:...|:||:|:......
Mouse   361 ALNPDVRDKWKSQTGLELHEG-------------YGQSETVVICGNSRNSTIKSGSMGKASPPYD 412

  Fly   362 MKIINDDGESLGPDEIGEV----------CIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYM 416
            ::|::::|..|.|.:.|.:          |..|     .|..|..:|...... .:|.:||..:|
Mouse   413 VQIVDEEGNVLPPGKEGNIAVRIKPTRPFCFFN-----CYLDNPEKTAASEQG-DFYITGDRAHM 471

  Fly   417 DRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVV----- 476
            |.||:.:.:.|..:::...:....|.::||.::|.|.|.|..|......|.|:...|.:|     
Mouse   472 DEDGYFWFLGRNDDVINSSSYRIGPVEVESALAEHPAVLESAVVSSPDPIRGEVVKAFIVLSPAY 536

  Fly   477 -----KKLGSELEAQDVVDYVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNR 523
                 :.|..||:     ::|::.| :.||.....| .:.:|.::.:||..|
Mouse   537 ASHDPEALTRELQ-----EHVKTVT-APYKYPRKVA-FISELPKTVSGKILR 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 109/563 (19%)
AFD_class_I 47..522 CDD:302604 108/541 (20%)
Acsm5XP_006507967.1 AFD_class_I 61..589 CDD:388389 113/570 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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