DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and Acsf2

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_722502.1 Gene:Acsf2 / 264895 MGIID:2388287 Length:615 Species:Mus musculus


Alignment Length:565 Identity:142/565 - (25%)
Similarity:238/565 - (42%) Gaps:83/565 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHM 94
            ::||.:....:|.|...|.:...|...|...:|.....:.||.:.|:||.:.|.:|:.|.|:...
Mouse    73 TVGECLDATAQRFPDREALVILHENIRLNFAQLKEEVDKAASGLLSIGLRKGDRLGMWGPNSYAW 137

  Fly    95 LAVAYACFFNGIAFHSLNITYDRDTIEKIY-KVTRPSIIF----------------CDGDEFEKV 142
            :.:..|....||...|:|..|....:|.:. ||....|:|                |  .|.||.
Mouse   138 VLIQLATAQAGIILVSVNPAYQSSELEYVLRKVGCKGIVFPKQFKTQQYYDILKQVC--PELEKA 200

  Fly   143 RSATAEL----DVKIVTMRNHPL-DSIKIDEVVATPIEENFQPAKLEKGNDQTLAIL-------- 194
            :....:.    |:..|...:.|| .::.:|::||.            .|.:|.||.|        
Mouse   201 QPGALKSERLPDLTTVISVDAPLPGTLLLDDIVAA------------GGKEQNLAQLRYNQRFLS 253

  Fly   195 C--------SSGTTGTPKAVTITNSRHILAGNYHLTTADVQYSHNTLDWITGLLT---------- 241
            |        :|||||.||..|:  |.|.:..|..|....::....|.:.:..:|.          
Mouse   254 CYDPINIQFTSGTTGNPKGATL--SHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSV 316

  Fly   242 --TITSGVFSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYM 304
              |:.|.:...|.:::..:|:...||..|...|.|.....|:....::|.|||.:.|.:|:|..:
Mouse   317 GGTMVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTSIRGGV 381

  Fly   305 FGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINCHFD---EKTGSVGQLVNGLKMKIIN 366
            ..||.|..|:.:.|.::::...|..|||.||...:..:|...|   :|.||||:::...:.:|:|
Mouse   382 IAGSPAPPELIRAIINKMNMKELVVVYGTTENSPVTFMNFPEDTLEQKAGSVGRIMPHTEAQIVN 446

  Fly   367 -DDGESLGPDEIGEV-----CIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIM 425
             :.||....:..||:     |:|     .||:|...:|........||.:||:..||..||..|:
Mouse   447 VETGELTNLNVPGELYIRGYCVM-----QGYWGEPQKTFETVGQDKWYRTGDIALMDEQGFCKIV 506

  Fly   426 DRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVD 490
            .|.|:|:.......||.::|....:.|||.|..|.|:.....|:|..|.:..|.|....|:::..
Mouse   507 GRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGETTTAEEIKA 571

  Fly   491 YVRSRTDSKYKQLNGGAVIVDDLQRSANGKTNRMANKAYF-LHLK 534
            :.:.:. |.:| :....|.|:....:.:||..:...:... .|||
Mouse   572 FCKGKI-SHFK-IPRYIVFVEGYPLTISGKIQKFKLREQMEQHLK 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 139/551 (25%)
AFD_class_I 47..522 CDD:302604 135/533 (25%)
Acsf2NP_722502.1 PRK08315 57..615 CDD:236236 142/565 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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