DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6300 and Slc27a1

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_006509734.1 Gene:Slc27a1 / 26457 MGIID:1347098 Length:657 Species:Mus musculus


Alignment Length:524 Identity:115/524 - (21%)
Similarity:202/524 - (38%) Gaps:98/524 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLLQSDIVGIIGRNTTHMLAVAYACFFN 104
            ||.|:..|.:.|:.|...|..:|...:..:|:..|.||....|:|.:........:.:.......
Mouse    98 RRQPERLALVDASSGICWTFAQLDTYSNAVANLFRQLGFAPGDVVAVFLEGRPEFVGLWLGLAKA 162

  Fly   105 GIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKVRSATAELDVKIVTMRNHPL-------D 162
            |:....||:...|:.:......:....:...|:....|...:.:|...::...:..|       |
Mouse   163 GVVAALLNVNLRREPLAFCLGTSAAKALIYGGEMAAAVAEVSEQLGKSLLKFCSGDLGPESILPD 227

  Fly   163 SIKIDEVVA----TPIEENFQPAKLEKGNDQTLAILCSSGTTGTPKAVTITNSRH--ILAGNYH- 220
            :..:|.::|    ||:.:  .|.   ||.|..|..:.:|||||.|||..:.:||:  |.|..:| 
Mouse   228 TQLLDPMLAEAPTTPLAQ--APG---KGMDDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGHHS 287

  Fly   221 --LTTADVQYS----HNTLDWITGL-------LTTITSGVFSTTRIIADNAFDPAFALRIIEEYK 272
              :..|||.|.    :::...|.|:       ||.:....||.:|...|........::.|.|. 
Mouse   288 YSMRAADVLYDCLPLYHSAGNIMGVGQCVIYGLTVVLRKKFSASRFWDDCVKYNCTVVQYIGEI- 351

  Fly   273 VTWTIQPPSSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQKGIRSRLSHDCLQFVYGFTELG 337
            ..:.::.|        ..|.|.            ..|..|.|..|:|..:..:..| .:|..::|
Mouse   352 CRYLLRQP--------VRDVEQ------------RHRVRLAVGNGLRPAIWEEFTQ-RFGVPQIG 395

  Fly   338 AM--AT-INC---HFDEKTGSVG------QLVNGLKMKIIND-------DGESL----GPDEIGE 379
            ..  || .||   :.|.|.||.|      ..|..:::..:|:       |.|.|    .|.|.|.
Mouse   396 EFYGATECNCSIANMDGKVGSCGFNSRILTHVYPIRLVKVNEDTMEPLRDSEGLCIPCQPGEPGL 460

  Fly   380 VCIMNNQ-----HWSGYYGNEVETRNMRDSL-----GWYHSGDLGYMDRDGFLYIMDRKKEMLKY 434
            :....||     .:.||..:....:.:..|:     ..|.|||:..||..|::|..||..:..::
Mouse   461 LVGQINQQDPLRRFDGYVSDSATNKKIAHSVFRKGDSAYLSGDVLVMDELGYMYFRDRSGDTFRW 525

  Fly   435 QNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSK 499
            :.......::|:|:|.:....:|.|:|:.......:|..|.:....|:|:           .:|.
Mouse   526 RGENVSTTEVEAVLSRLLGQTDVAVYGVAVPGVEGKAGMAAIADPHSQLD-----------PNSM 579

  Fly   500 YKQL 503
            |::|
Mouse   580 YQEL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 115/524 (22%)
AFD_class_I 47..522 CDD:302604 112/517 (22%)
Slc27a1XP_006509734.1 AFD_class_I 115..622 CDD:418409 109/507 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839077
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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