DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and Dip2c

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_006516536.1 Gene:Dip2c / 208440 MGIID:1920179 Length:1616 Species:Mus musculus


Alignment Length:636 Identity:155/636 - (24%)
Similarity:246/636 - (38%) Gaps:164/636 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DNDQKIWSGEPVVKYFDPDLSIGEIIFHEMRRHP-QLTAQISATEGTV---LTRGELLANAMRLA 70
            ||||    ...|...|   |.:.|::....:..| .|...:....||:   ||..:|...|.::|
Mouse  1018 DNDQ----ARKVRTEF---LFLSEVLQWRAQTTPDHLLYTLLNCRGTIANSLTCVQLHKRAEKIA 1075

  Fly    71 SYMRSLGLLQ-SDIVGIIGRNTTHMLAVAYACFFNGIA------FHSLNITYDRDTIEKIYKVTR 128
            ..:...|.|| .|.|.::......::|..|.|.:.|..      .|..||.....|::.|.:|:|
Mouse  1076 VMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSR 1140

  Fly   129 PSI-----IFCDGDEFEKVRSATAELDVKIVTMRNHPLDSIKIDEVVATPIEENFQPAKLEK-GN 187
            .:.     :.|   :..:.|.|.|.:||     |..||       ::.|......:||::.| .|
Mouse  1141 SACLMTTQLIC---KLLRSREAAAAVDV-----RTWPL-------ILDTDDLPKKRPAQIYKPSN 1190

  Fly   188 DQTLAIL-CSSGTTGTPKAVTITNSRHILAGNYHLTTADVQYSHNT------------------- 232
            ..|||.| .|..|||            :|||        |:.||..                   
Mouse  1191 PDTLAYLDFSVSTTG------------MLAG--------VKMSHAATSAFCRSIKLQCELYPSRE 1235

  Fly   233 ----LDWITGL------LTTITSGVFSTTRIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMI 287
                ||...||      |.::.||..|.....::...:||..|..:.:|||..|....|.|.|..
Mouse  1236 VAICLDPYCGLGFVLWCLCSVYSGHQSILIPPSELETNPALWLLAVSQYKVRDTFCSYSVMELCT 1300

  Fly   288 NCPDFET-------CDMSSLR-CYMFGGSRAALEVQKGIRSRLSHD------------------- 325
            .....:|       .|:|.:| |.:....|..:.:.:.. |:|..|                   
Mouse  1301 KGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSF-SKLFKDLGLHPRAVSTSFGCRVNLA 1364

  Fly   326 -CLQFVYG------FTELGAMATINCHFDEKTGS--------VGQLVNGLKMKIINDDGES-LGP 374
             |||...|      :.::.|:........|: ||        .|:::.|:::.|.|.:.:. ||.
Mouse  1365 ICLQGTSGPDPTTVYVDMRALRHDRVRLVER-GSPHSLPLMESGKILPGVRIIIANPETKGPLGD 1428

  Fly   375 DEIGEVCIMNNQHWSGY---YGNE---VETRNMRDSLG-----WYHSGDLGYM----------DR 418
            ..:||:.:.:..:.|||   ||:|   .:..|.|.|.|     |..:|.||::          :|
Mouse  1429 SHLGEIWVHSAHNASGYFTIYGDESLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGER 1493

  Fly   419 DGFLYIMDRKKEMLKYQNIMYYPNDIE-SVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSE 482
            ...||::....|.::.:.:.|:|.||| |||.....|.|..|| .|:|:.     ..||:..|||
Mouse  1494 HDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVF-TWTNLL-----VVVVELDGSE 1552

  Fly   483 LEAQDVVDYVRSRTDSKYKQLNGGAVIVD--DLQRSANGKTNRMANKAYFL 531
            .||.|:|..|.:....::..:.|..|:||  .:..::.|:..||..:..||
Mouse  1553 QEALDLVPLVTNVVLEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRDGFL 1603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 145/610 (24%)
AFD_class_I 47..522 CDD:302604 141/587 (24%)
Dip2cXP_006516536.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1612 CDD:341231 145/599 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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