DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6300 and Acsm3

DIOPT Version :9

Sequence 1:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_017177549.1 Gene:Acsm3 / 20216 MGIID:99538 Length:593 Species:Mus musculus


Alignment Length:342 Identity:87/342 - (25%)
Similarity:157/342 - (45%) Gaps:39/342 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 NDQTLAILCSSGTTGTPKAVTITNSRHILA----GNY--HLTTADVQYSHNTLDWITGLLTTITS 245
            :|:.:||..:|||||.||.:..|:|...|.    |.:  .|..:||.:  ||.|  ||...:..|
Mouse   220 HDEMMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIASDVMW--NTSD--TGWAKSAWS 280

  Fly   246 GVFST----TRIIAD--NAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYM 304
            .|||.    ..:.|.  ..|:....|:.:.::.:|.....|::..:::......:...:||:..:
Mouse   281 SVFSPWTQGACVFAHYLPRFESTSILQTLSKFPITVFCSAPTAYRMLVQNDMSRSYKFNSLKHCV 345

  Fly   305 FGGSRAALEVQKGIRSRLSHDCLQFVYGFTELGAMATINC-HFDE---KTGSVGQLVNGLKMKII 365
            ..|.....||.:..|.:...|..: .||.||    ..:.| :|..   |.||:|:......:||:
Mouse   346 SAGEPINPEVMEQWRKKTGLDIYE-GYGQTE----TVLICGNFKGMKIKPGSMGKPSPAFDVKIL 405

  Fly   366 NDDGESLGPDEIGEVCIMNNQH-----WSGYYGNEVETRN-MRDSLGWYHSGDLGYMDRDGFLYI 424
            :::|.:|.|.:.|::.:.....     ::.|..|..:|.: :|.|  :|.:||.||||.||:.:.
Mouse   406 DENGATLPPGQEGDIALQVLPERPFGLFTHYVDNPSKTASTLRGS--FYITGDRGYMDEDGYFWF 468

  Fly   425 MDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVV-----KKLGSELE 484
            :.|..:::........|.::||.:.|.|.:||..|......|.|:...|.:|     |....|..
Mouse   469 VARSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKAFIVLNPDYKSHDQEQL 533

  Fly   485 AQDVVDYVRSRTDSKYK 501
            .:::.::|: :|.:.||
Mouse   534 KKEIQEHVK-KTTAPYK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6300NP_650828.1 CaiC 26..523 CDD:223395 87/342 (25%)
AFD_class_I 47..522 CDD:302604 87/342 (25%)
Acsm3XP_017177549.1 AFD_class_I 48..554 CDD:388389 87/342 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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